Filters

Selected filters
orthologous_group:OG0003508
Organism (57)
Amaranthus hypochondriacus (2)
Amborella trichopoda (2)
Ananas comosus (1)
Aquilegia coerulea (5)
Arabidopsis halleri (2)
Arabidopsis lyrata (2)
Arabidopsis thaliana (3)
Boea hygrometrica (1)
Boechera stricta (2)
Brachypodium distachyon (2)
Brachypodium stacei (2)
Brassica oleracea (2)
Brassica rapa (2)
Capsella grandiflora (2)
Capsella rubella (3)
Carica papaya (1)
Citrus clementina (5)
Citrus sinensis (3)
Cucumis sativus (3)
Daucus carota (3)
Eucalyptus grandis (3)
Eutrema salsugineum (2)
Fragaria vesca (2)
Glycine max (5)
Gossypium raimondii (6)
Kalanchoe fedtschenkoi (7)
Kalanchoe laxiflora (10)
Linum usitatissimum (6)
Malus domestica (4)
Manihot esculenta (1)
Medicago truncatula (3)
Mimulus guttatus (2)
Musa acuminata (2)
Oropetium thomaeum (2)
Oryza sativa (4)
Ostreococcus lucimarinus (1)
Panicum hallii (3)
Panicum virgatum (11)
Pearl millet (2)
Phaseolus vulgaris (3)
Populus simonii (3)
Populus trichocarpa (5)
Prunus persica (4)
Ricinus communis (2)
Salix purpurea (2)
Setaria italica (2)
Setaria viridis (2)
Solanum lycopersicum (2)
Solanum tuberosum (2)
Sorghum bicolor (4)
Spirodela polyrhiza (1)
Theobroma cacao (3)
Trifolium pratense (2)
Vitis vinifera (2)
Zea mays (3)
Zea maysPH207 (2)
Zostera marina (2)
Feature type
polypeptide (170)
Orthology
orthology (170)
Coexpression
no coexpression groups (170)
Orthologous coexpression
coexpression (170)
Analyses
diamond matches (170)
interproscan matches (142)
no interproscan matches (28)
Orthologous group
OG0003508 (170)

Results

TSV FASTA
Organism Feature Type Feature ID Info Relationship Display Orthologous Group Coexpression Group
Medicago truncatula polypeptide Medtr5g030020.1.JCVIMt4.0v1 Medtr5g030020.1 mRNA KOG0106//KOG0110//KOG0131 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // RNA-binding protein (RRM superfamily) // Splicing factor 3b, subunit 4 (1 of 1) OG0003508
Mimulus guttatus polypeptide Migut.A01012.1.v2.0 Migut.A01012.1 mRNA KOG0106//KOG0131//KOG0144 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) (1 of 1) OG0003508
Mimulus guttatus polypeptide Migut.N02875.1.v2.0 Migut.N02875.1 mRNA KOG0131//KOG0146//KOG4206 - Splicing factor 3b, subunit 4 // RNA-binding protein ETR-3 (RRM superfamily) // Spliceosomal protein snRNP-U1A/U2B (1 of 1) OG0003508
Oropetium thomaeum polypeptide Oropetium_20150105_01535A.v1.0 Oropetium_20150105_01535A mRNA PF00076//PF14259 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // RNA recognition motif (a.k.a. RRM, RBD, or RNP domain) (RRM_6) (1 of 12) OG0003508
Oropetium thomaeum polypeptide Oropetium_20150105_20371A.v1.0 Oropetium_20150105_20371A mRNA PF00076//PF14259 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // RNA recognition motif (a.k.a. RRM, RBD, or RNP domain) (RRM_6) (1 of 12) OG0003508
Solanum tuberosum polypeptide PGSC0003DMT400045166.v4.03 PGSC0003DMT400045166 mRNA Ribonucleoprotein, chloroplast OG0003508
Solanum tuberosum polypeptide PGSC0003DMT400079237.v4.03 PGSC0003DMT400079237 mRNA Ribonucleoprotein, chloroplast OG0003508
Panicum hallii polypeptide Pahal.F01676.1.v2.0 Pahal.F01676.1 mRNA KOG0131 - Splicing factor 3b, subunit 4 (1 of 26) OG0003508
Panicum hallii polypeptide Pahal.G02125.1.v2.0 Pahal.G02125.1 mRNA KOG0131 - Splicing factor 3b, subunit 4 (1 of 26) OG0003508
Panicum hallii polypeptide Pahal.G02125.2.v2.0 Pahal.G02125.2 mRNA OG0003508
Panicum virgatum polypeptide Pavir.Fa00637.1.v1.1 Pavir.Fa00637.1 mRNA KOG0131 - Splicing factor 3b, subunit 4 (1 of 56) OG0003508
Panicum virgatum polypeptide Pavir.Fa00637.2.v1.1 Pavir.Fa00637.2 mRNA OG0003508
Panicum virgatum polypeptide Pavir.Ga00767.1.v1.1 Pavir.Ga00767.1 mRNA KOG0131 - Splicing factor 3b, subunit 4 (1 of 56) OG0003508
Panicum virgatum polypeptide Pavir.Ga00767.2.v1.1 Pavir.Ga00767.2 mRNA OG0003508
Panicum virgatum polypeptide Pavir.Gb00819.1.v1.1 Pavir.Gb00819.1 mRNA PTHR15597 - ATAXIN 2-BINDING PROTEIN 1-RELATED (1 of 1) OG0003508
Panicum virgatum polypeptide Pavir.J08510.1.v1.1 Pavir.J08510.1 mRNA KOG0131 - Splicing factor 3b, subunit 4 (1 of 56) OG0003508
Panicum virgatum polypeptide Pavir.J08510.2.v1.1 Pavir.J08510.2 mRNA OG0003508
Panicum virgatum polypeptide Pavir.J08510.3.v1.1 Pavir.J08510.3 mRNA OG0003508
Panicum virgatum polypeptide Pavir.J20281.1.v1.1 Pavir.J20281.1 mRNA KOG0106//KOG0114//KOG0130//KOG4206 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Predicted RNA-binding protein (RRM superfamily) // RNA-binding protein RBM8/Tsunagi (RRM superfamily) // Spliceosomal protein snRNP-U1A/U2B (1 of 1) OG0003508
Panicum virgatum polypeptide Pavir.J20281.2.v1.1 Pavir.J20281.2 mRNA OG0003508
Panicum virgatum polypeptide Pavir.J20281.3.v1.1 Pavir.J20281.3 mRNA OG0003508
Pearl millet polypeptide Pgl_GLEAN_10012650 mRNA OG0003508
Pearl millet polypeptide Pgl_GLEAN_10026969 mRNA OG0003508
Phaseolus vulgaris polypeptide Phvul.002G140400.1.v2.1 Phvul.002G140400.1 mRNA KOG0106//KOG0131//KOG0144 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) (1 of 1) OG0003508
Phaseolus vulgaris polypeptide Phvul.009G033600.1.v2.1 Phvul.009G033600.1 mRNA OG0003508
Phaseolus vulgaris polypeptide Phvul.009G033600.2.v2.1 Phvul.009G033600.2 mRNA KOG0105//KOG0106//KOG0131 - Alternative splicing factor ASF/SF2 (RRM superfamily) // Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Splicing factor 3b, subunit 4 (1 of 1) OG0003508
Populus trichocarpa polypeptide Potri.001G141300.1.v3.0 Potri.001G141300.1 mRNA similar to 33 kDa ribonucleoprotein; similar to chloroplast; putative; similar to RNA-binding protein cp33; putative; similar to SP|P19684|33 kDa ribonucleoprotein ; similar to chloroplast precursor {Nicotiana sylvestris}; [ ortholog of At2g35410,] OG0003508
Populus trichocarpa polypeptide Potri.001G141300.2.v3.0 Potri.001G141300.2 mRNA similar to 33 kDa ribonucleoprotein; similar to chloroplast; putative; similar to RNA-binding protein cp33; putative; similar to SP|P19684|33 kDa ribonucleoprotein ; similar to chloroplast precursor {Nicotiana sylvestris}; [ ortholog of At2g35410,] OG0003508
Populus trichocarpa polypeptide Potri.005G161000.1.v3.0 Potri.005G161000.1 mRNA similar to RNA recognition motif (RRM)-containing protein; similar to low similarity to enhancer binding protein-1; similar to EBP1 (Entamoeba histolytica) GI:8163877; similar to SP|P19682 28 kDa ribonucleoprotein; similar to chloroplast precursor (28RNP) OG0003508
Populus trichocarpa polypeptide Potri.005G161000.2.v3.0 Potri.005G161000.2 mRNA similar to RNA recognition motif (RRM)-containing protein; similar to low similarity to enhancer binding protein-1; similar to EBP1 (Entamoeba histolytica) GI:8163877; similar to SP|P19682 28 kDa ribonucleoprotein; similar to chloroplast precursor (28RNP) OG0003508
Populus trichocarpa polypeptide Potri.005G161000.3.v3.0 Potri.005G161000.3 mRNA similar to RNA recognition motif (RRM)-containing protein; similar to low similarity to enhancer binding protein-1; similar to EBP1 (Entamoeba histolytica) GI:8163877; similar to SP|P19682 28 kDa ribonucleoprotein; similar to chloroplast precursor (28RNP) OG0003508
Prunus persica polypeptide Prupe.1G523800.1.v2.1 Prupe.1G523800.1 mRNA KOG0106//KOG0131//KOG0144 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) (1 of 1) OG0003508
Prunus persica polypeptide Prupe.1G523800.2.v2.1 Prupe.1G523800.2 mRNA OG0003508
Prunus persica polypeptide Prupe.5G034000.1.v2.1 Prupe.5G034000.1 mRNA KOG0106//KOG0110//KOG0131 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // RNA-binding protein (RRM superfamily) // Splicing factor 3b, subunit 4 (1 of 1) OG0003508
Prunus persica polypeptide Prupe.5G034000.2.v2.1 Prupe.5G034000.2 mRNA OG0003508
Salix purpurea polypeptide SapurV1A.0555s0040.1.v1.0 SapurV1A.0555s0040.1 mRNA RNA recognition motif 2 in yeast nucleolar protein 4 (Nop4p)-like protein OG0003508
Salix purpurea polypeptide SapurV1A.0687s0030.1.v1.0 SapurV1A.0687s0030.1 mRNA RNA recognition motif (RRM) superfamily protein OG0003508
Setaria italica polypeptide Seita.6G186800.1.v2.2 Seita.6G186800.1 mRNA KOG0106//KOG0110//KOG0114//KOG0130//KOG4206 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // RNA-binding protein (RRM superfamily) // Predicted RNA-binding protein (RRM superfamily) // RNA-binding protein RBM8/Tsunagi (RRM superfamily) // Spliceosomal protein snRNP-U1A/U2B (1 of 1) OG0003508
Setaria italica polypeptide Seita.7G218700.1.v2.2 Seita.7G218700.1 mRNA PF00076//PF14259 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // RNA recognition motif (a.k.a. RRM, RBD, or RNP domain) (RRM_6) (1 of 13) OG0003508
Setaria viridis polypeptide Sevir.6G193200.1.v1.1 Sevir.6G193200.1 mRNA KOG0106//KOG0110//KOG0114//KOG0130//KOG4206 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // RNA-binding protein (RRM superfamily) // Predicted RNA-binding protein (RRM superfamily) // RNA-binding protein RBM8/Tsunagi (RRM superfamily) // Spliceosomal protein snRNP-U1A/U2B (1 of 1) OG0003508
Setaria viridis polypeptide Sevir.7G230300.1.v1.1 Sevir.7G230300.1 mRNA PF00076//PF14259 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // RNA recognition motif (a.k.a. RRM, RBD, or RNP domain) (RRM_6) (1 of 12) OG0003508
Populus simonii polypeptide Simonii00014058-RA Simonii00014058-RA mRNA OG0003508
Populus simonii polypeptide Simonii00014516-RA Simonii00014516-RA mRNA OG0003508
Populus simonii polypeptide Simonii00035958-RA Simonii00035958-RA mRNA OG0003508
Sorghum bicolor polypeptide Sobic.006G197700.1.v3.2 Sobic.006G197700.1 mRNA similar to OSIGBa0142I02-OSIGBa0101B20.3 protein OG0003508
Sorghum bicolor polypeptide Sobic.006G197700.2.v3.2 Sobic.006G197700.2 mRNA similar to OSIGBa0142I02-OSIGBa0101B20.3 protein OG0003508
Sorghum bicolor polypeptide Sobic.006G197700.3.v3.2 Sobic.006G197700.3 mRNA similar to OSIGBa0142I02-OSIGBa0101B20.3 protein OG0003508
Sorghum bicolor polypeptide Sobic.007G227600.2.v3.2 Sobic.007G227600.2 mRNA similar to Putative uncharacterized protein OG0003508
Solanum lycopersicum polypeptide Solyc04g074750.2.1.ITAG2.4 Solyc04g074750.2.1 mRNA KOG0106//KOG0144 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) (1 of 1) OG0003508
Solanum lycopersicum polypeptide Solyc08g076840.2.1.ITAG2.4 Solyc08g076840.2.1 mRNA KOG0106//KOG0110//KOG0114//KOG0131//KOG0144//KOG0146 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // RNA-binding protein (RRM superfamily) // Predicted RNA-binding protein (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) // RNA-binding protein ETR-3 (RRM superfamily) (1 of 1) OG0003508

Number of records: 10 50 100 500 1000