Arabidopsis thaliana

mRNA: AT5G62800.1

ID: AT5G62800.1.TAIR10
Display: Protein with RING/U-box and TRAF-like domains

DBxRefs: PACID:19669032

Gene: AT5G62800.TAIR10
Polypeptide: AT5G62800.1.TAIR10 Protein with RING/U-box and TRAF-like domains

Location

Athaliana_Chr5:25218662..25219967 1

Assay source Assay name Assay description Biomaterial name Biomaterial description Treatment Score normalized (TPM)
SRR7367127.htseq SRR7367127 cold stress 10oC 1h ZT6 rep1 GSM3204844 Seedling Cold stress 0.11
SRR6902931.htseq SRR6902931 low water WT stress replicate 1 GSM3068810 Seedling Low water stress 0.16
SRR6902958.htseq SRR6902958 low water WT stress replicate 3 GSM3068818 Seedling Low water stress 0.19
SRR6902945.htseq SRR6902945 low water WT stress replicate 2 GSM3068814 Seedling Low water stress 0.06
SRR4033020.htseq SRR4033020 Heat stress rep3 GSM2280288 Leaf Heat stress 0.02
SRR6902932.htseq SRR6902932 low water WT stress replicate 1 GSM3068810 Seedling Low water stress 0.32
SRR7405097.htseq SRR7405097 200 mM NaCl for 16 hrs Col_0_NaCl1 GSM3208265 Seedling Salinity stress 22.90
SRR6902946.htseq SRR6902946 low water WT stress replicate 2 GSM3068814 Seedling Low water stress 0.19
SRR7405104.htseq SRR7405104 200 mM NaCl for 16 hrs Col_0_NaCl3 GSM3208267 Seedling Salinity stress 19.70
SRR6902956.htseq SRR6902956 low water WT stress replicate 3 GSM3068818 Seedling Low water stress 0.06
SRR6902944.htseq SRR6902944 low water WT stress replicate 2 GSM3068814 Seedling Low water stress 0.93
SRR7405099.htseq SRR7405099 200 mM NaCl for 16 hrs Col_0_NaCl1 GSM3208265 Seedling Salinity stress 25.59
SRR7405102.htseq SRR7405102 200 mM NaCl for 16 hrs Col_0_NaCl2 GSM3208266 Seedling Salinity stress 21.54
SRR7367119.htseq SRR7367119 heat stress 37oC 1h ZT1 rep1 GSM3204836 Seedling Heat stress 0.81
SRR7405100.htseq SRR7405100 200 mM NaCl for 16 hrs Col_0_NaCl2 GSM3208266 Seedling Salinity stress 23.39
SRR7405101.htseq SRR7405101 200 mM NaCl for 16 hrs Col_0_NaCl2 GSM3208266 Seedling Salinity stress 19.61
SRR7405098.htseq SRR7405098 200 mM NaCl for 16 hrs Col_0_NaCl1 GSM3208265 Seedling Salinity stress 26.95
SRR7160928.htseq SRR7160928 osmotic stress r1 GSM3140728 Seedling Osmotic stress 2.95
SRR7160929.htseq SRR7160929 osmotic stress r2 GSM3140729 Seedling Osmotic stress 2.81
SRR7405103.htseq SRR7405103 200 mM NaCl for 16 hrs Col_0_NaCl2 GSM3208266 Seedling Salinity stress 22.05
SRR7405106.htseq SRR7405106 200 mM NaCl for 16 hrs Col_0_NaCl3 GSM3208267 Seedling Salinity stress 17.01
SRR7405105.htseq SRR7405105 200 mM NaCl for 16 hrs Col_0_NaCl3 GSM3208267 Seedling Salinity stress 20.27
SRR7405107.htseq SRR7405107 200 mM NaCl for 16 hrs Col_0_NaCl3 GSM3208267 Seedling Salinity stress 17.34
SRR7405096.htseq SRR7405096 200 mM NaCl for 16 hrs Col_0_NaCl1 GSM3208265 Seedling Salinity stress 25.12
SRR9016750.htseq SRR9016750 cold stress 4oC 24h rep 1 GSM3752566 Seedling Cold stress 0.03
SRR9016747.htseq SRR9016747 cold stress 4oC 0h rep 2 GSM3752563 Seedling Cold stress 0.31
SRR9016746.htseq SRR9016746 cold stress 4oC 0h rep 1 GSM3752562 Seedling Cold stress 0.03
SRR9016751.htseq SRR9016751 cold stress 4oC 24h rep 2 GSM3752567 Seedling Cold stress 0.02
SRR2932377.htseq SRR2932377 dehydration 3h rep1 GSM1936771 Seedling Dehydration 0.21
SRR6902930.htseq SRR6902930 low water WT stress replicate 1 GSM3068810 Seedling Low water stress 0.05
SRR2932378.htseq SRR2932378 dehydration 3h rep1 GSM1936772 Seedling Dehydration 0.15
SRR8667490.htseq SRR8667490 cold stress 4oC 24h rep1 GSM3639342 Seedling Cold stress 0.06
SRR8667484.htseq SRR8667484 cold stress 4oC 0h rep1 GSM3639336 Seedling Cold stress 0.03
SRR2932379.htseq SRR2932379 dehydration 3h rep3 GSM1936773 Seedling Dehydration 0.17
SRR7779219.htseq SRR7779219 drought stress without water for 5 days rep1 GSM3373992 Root Drought stress 0.79
SRR7779220.htseq SRR7779220 drought stress without water for 5 days rep2 GSM3373993 Root Drought stress 0.23
SRR7779221.htseq SRR7779221 drought stress without water for 5 days rep3 GSM3373994 Root Drought stress 0.19
SRR7160930.htseq SRR7160930 osmotic stress r3 GSM3140730 Seedling Osmotic stress 3.13
SRR8666077.htseq SRR8666077 low water WT stress replicate 1 GSM3639178 Seedling Low water stress 0.32
SRR8666089.htseq SRR8666089 low water WT stress replicate 2 GSM3639182 Seedling Low water stress 0.19
SRR8666087.htseq SRR8666087 low water WT stress replicate 2 GSM3639182 Seedling Low water stress 0.93
SRR8666076.htseq SRR8666076 low water WT stress replicate 1 GSM3639178 Seedling Low water stress 0.16
SRR8666075.htseq SRR8666075 low water WT stress replicate 1 GSM3639178 Seedling Low water stress 0.05
SRR7659149.htseq SRR7659149 heat stress GSM3324328 Leaf Heat stress 0.21
SRR8666099.htseq SRR8666099 low water WT stress replicate 3 GSM3639186 Seedling Low water stress 0.06
SRR8666101.htseq SRR8666101 low water WT stress replicate 3 GSM3639186 Seedling Low water stress 0.19
SRR7511617.htseq SRR7511617 cold stress 4oC 24h GSM3265402 Leaf Cold stress 0.02
SRR8666088.htseq SRR8666088 low water WT stress replicate 2 GSM3639182 Seedling Low water stress 0.06
SRR7659150.htseq SRR7659150 heat stress GSM3324329 Leaf Heat stress 0.12