Arabidopsis thaliana

mRNA: AT5G54000.1

ID: AT5G54000.1.TAIR10
Display: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

DBxRefs: PACID:19667866

Gene: AT5G54000.TAIR10
Polypeptide: AT5G54000.1.TAIR10 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

Location

Athaliana_Chr5:21917775..21919064 -1

Assay source Assay name Assay description Biomaterial name Biomaterial description Treatment Score normalized (TPM)
SRR6902931.htseq SRR6902931 low water WT stress replicate 1 GSM3068810 Seedling Low water stress 0.76
SRR6902958.htseq SRR6902958 low water WT stress replicate 3 GSM3068818 Seedling Low water stress 0.06
SRR7367106.htseq SRR7367106 cold stress 10oC 1h ZT1 rep4 GSM3204823 Seedling Cold stress 0.31
SRR6902957.htseq SRR6902957 low water WT stress replicate 3 GSM3068818 Seedling Low water stress 0.69
SRR6902932.htseq SRR6902932 low water WT stress replicate 1 GSM3068810 Seedling Low water stress 0.16
SRR7405097.htseq SRR7405097 200 mM NaCl for 16 hrs Col_0_NaCl1 GSM3208265 Seedling Salinity stress 18.61
SRR6902946.htseq SRR6902946 low water WT stress replicate 2 GSM3068814 Seedling Low water stress 0.31
SRR7405104.htseq SRR7405104 200 mM NaCl for 16 hrs Col_0_NaCl3 GSM3208267 Seedling Salinity stress 12.37
SRR6902956.htseq SRR6902956 low water WT stress replicate 3 GSM3068818 Seedling Low water stress 0.25
SRR6902944.htseq SRR6902944 low water WT stress replicate 2 GSM3068814 Seedling Low water stress 0.06
SRR7405099.htseq SRR7405099 200 mM NaCl for 16 hrs Col_0_NaCl1 GSM3208265 Seedling Salinity stress 16.23
SRR7367129.htseq SRR7367129 cold stress 10oC 1h ZT6 rep2 GSM3204846 Seedling Cold stress 0.15
SRR7405102.htseq SRR7405102 200 mM NaCl for 16 hrs Col_0_NaCl2 GSM3208266 Seedling Salinity stress 13.40
SRR7405100.htseq SRR7405100 200 mM NaCl for 16 hrs Col_0_NaCl2 GSM3208266 Seedling Salinity stress 15.16
SRR7405101.htseq SRR7405101 200 mM NaCl for 16 hrs Col_0_NaCl2 GSM3208266 Seedling Salinity stress 12.14
SRR7367133.htseq SRR7367133 heat stress 37oC 1h ZT6 rep1 GSM3204850 Seedling Heat stress 0.11
SRR7405098.htseq SRR7405098 200 mM NaCl for 16 hrs Col_0_NaCl1 GSM3208265 Seedling Salinity stress 19.60
SRR7160928.htseq SRR7160928 osmotic stress r1 GSM3140728 Seedling Osmotic stress 0.59
SRR7160929.htseq SRR7160929 osmotic stress r2 GSM3140729 Seedling Osmotic stress 0.57
SRR7405103.htseq SRR7405103 200 mM NaCl for 16 hrs Col_0_NaCl2 GSM3208266 Seedling Salinity stress 13.23
SRR7405106.htseq SRR7405106 200 mM NaCl for 16 hrs Col_0_NaCl3 GSM3208267 Seedling Salinity stress 12.78
SRR7405105.htseq SRR7405105 200 mM NaCl for 16 hrs Col_0_NaCl3 GSM3208267 Seedling Salinity stress 14.42
SRR7774145.htseq SRR7774145 heat stress 30oC 1h AM ZT 0.5 rep2 GSM3370070 Seedling Heat stress 0.12
SRR7405107.htseq SRR7405107 200 mM NaCl for 16 hrs Col_0_NaCl3 GSM3208267 Seedling Salinity stress 11.06
SRR7774148.htseq SRR7774148 heat stress 30oC 1h PM ZT 12.5 rep1 GSM3370073 Seedling Heat stress 0.06
SRR7405096.htseq SRR7405096 200 mM NaCl for 16 hrs Col_0_NaCl1 GSM3208265 Seedling Salinity stress 16.33
SRR9016750.htseq SRR9016750 cold stress 4oC 24h rep 1 GSM3752566 Seedling Cold stress 0.08
SRR9016746.htseq SRR9016746 cold stress 4oC 0h rep 1 GSM3752562 Seedling Cold stress 0.03
SRR9016751.htseq SRR9016751 cold stress 4oC 24h rep 2 GSM3752567 Seedling Cold stress 0.06
SRR8667486.htseq SRR8667486 cold stress 4oC 0h rep3 GSM3639338 Seedling Cold stress 0.02
SRR8667485.htseq SRR8667485 cold stress 4oC 0h rep2 GSM3639337 Seedling Cold stress 0.03
SRR6902930.htseq SRR6902930 low water WT stress replicate 1 GSM3068810 Seedling Low water stress 0.27
SRR8667484.htseq SRR8667484 cold stress 4oC 0h rep1 GSM3639336 Seedling Cold stress 0.03
SRR2932379.htseq SRR2932379 dehydration 3h rep3 GSM1936773 Seedling Dehydration 0.01
SRR7774146.htseq SRR7774146 heat stress 30oC 1h AM ZT 0.5 rep3 GSM3370071 Seedling Heat stress 0.29
SRR7774147.htseq SRR7774147 heat stress 30oC 1h AM ZT 0.5 rep4 GSM3370072 Seedling Heat stress 0.16
SRR7774150.htseq SRR7774150 heat stress 30oC 1h PM ZT 12.5 rep3 GSM3370075 Seedling Heat stress 0.23
SRR7774151.htseq SRR7774151 heat stress 30oC 1h PM ZT 12.5 rep4 GSM3370076 Seedling Heat stress 0.08
SRR7774154.htseq SRR7774154 heat stress 30oC 1h AM ZT 0.5 and constant light GSM3370079 Seedling Heat stress 0.20
SRR7774155.htseq SRR7774155 heat stress 30oC 1h PM ZT 12.5 and constant light GSM3370080 Seedling Heat stress 0.22
SRR7160930.htseq SRR7160930 osmotic stress r3 GSM3140730 Seedling Osmotic stress 0.27
SRR8666077.htseq SRR8666077 low water WT stress replicate 1 GSM3639178 Seedling Low water stress 0.16
SRR8666089.htseq SRR8666089 low water WT stress replicate 2 GSM3639182 Seedling Low water stress 0.31
SRR8666100.htseq SRR8666100 low water WT stress replicate 3 GSM3639186 Seedling Low water stress 0.69
SRR8666087.htseq SRR8666087 low water WT stress replicate 2 GSM3639182 Seedling Low water stress 0.06
SRR8666076.htseq SRR8666076 low water WT stress replicate 1 GSM3639178 Seedling Low water stress 0.76
SRR8666075.htseq SRR8666075 low water WT stress replicate 1 GSM3639178 Seedling Low water stress 0.27
SRR8666099.htseq SRR8666099 low water WT stress replicate 3 GSM3639186 Seedling Low water stress 0.25
SRR8666101.htseq SRR8666101 low water WT stress replicate 3 GSM3639186 Seedling Low water stress 0.06