Arabidopsis thaliana

mRNA: AT5G53680.1

ID: AT5G53680.1.TAIR10
Display: RNA-binding (RRM/RBD/RNP motifs) family protein

DBxRefs: PACID:19668523

Gene: AT5G53680.TAIR10
Polypeptide: AT5G53680.1.TAIR10 RNA-binding (RRM/RBD/RNP motifs) family protein

Location

Athaliana_Chr5:21798381..21799109 1

Assay source Assay name Assay description Biomaterial name Biomaterial description Treatment Score normalized (TPM)
SRR7367127.htseq SRR7367127 cold stress 10oC 1h ZT6 rep1 GSM3204844 Seedling Cold stress 0.05
SRR6427370.htseq SRR6427370 drought stress without water for 5 days rep1 GSM2906494 Whole plant Drought stress 0.37
SRR4033018.htseq SRR4033018 Heat stress rep1 GSM2280286 Leaf Heat stress 1.22
SRR6359065.htseq SRR6359065 heat stress 43oC GSM2881006 Root Heat stress 106.45
SRR6902945.htseq SRR6902945 low water WT stress replicate 2 GSM3068814 Seedling Low water stress 0.06
SRR4033020.htseq SRR4033020 Heat stress rep3 GSM2280288 Leaf Heat stress 2.43
SRR6902932.htseq SRR6902932 low water WT stress replicate 1 GSM3068810 Seedling Low water stress 0.16
SRR4033019.htseq SRR4033019 Heat stress rep2 GSM2280287 Leaf Heat stress 0.93
SRR6427371.htseq SRR6427371 drought stress without water for 5 days rep2 GSM2906495 Whole plant Drought stress 0.34
SRR5197908.htseq SRR5197908 WT RL3h rep2 heat stress 37C 3h GSM2467114 Leaf Heat stress 0.12
SRR7367120.htseq SRR7367120 heat stress 37oC 1h ZT1 rep2 GSM3204837 Seedling Heat stress 56.59
SRR7367121.htseq SRR7367121 heat stress 37oC 1h ZT1 rep3 GSM3204838 Seedling Heat stress 64.20
SRR7367129.htseq SRR7367129 cold stress 10oC 1h ZT6 rep2 GSM3204846 Seedling Cold stress 0.07
SRR6359066.htseq SRR6359066 heat stress 43oC GSM2881007 Root Heat stress 157.23
SRR7367119.htseq SRR7367119 heat stress 37oC 1h ZT1 rep1 GSM3204836 Seedling Heat stress 42.75
SRR7367133.htseq SRR7367133 heat stress 37oC 1h ZT6 rep1 GSM3204850 Seedling Heat stress 43.58
SRR7367122.htseq SRR7367122 heat stress 37oC 1h ZT1 rep4 GSM3204839 Seedling Heat stress 84.41
SRR7160929.htseq SRR7160929 osmotic stress r2 GSM3140729 Seedling Osmotic stress 0.15
SRR7367136.htseq SRR7367136 heat stress 37oC 1h ZT6 rep2 GSM3204853 Seedling Heat stress 57.16
SRR7774145.htseq SRR7774145 heat stress 30oC 1h AM ZT 0.5 rep2 GSM3370070 Seedling Heat stress 0.09
SRR7774148.htseq SRR7774148 heat stress 30oC 1h PM ZT 12.5 rep1 GSM3370073 Seedling Heat stress 0.15
SRR5167849.htseq SRR5167849 WT dehydration3 GSM2453040 Leaf Dehydration 0.03
SRR5197909.htseq SRR5197909 WT RL3h rep3 heat stress 37C 3h GSM2467115 Leaf Heat stress 0.76
SRR2932377.htseq SRR2932377 dehydration 3h rep1 GSM1936771 Seedling Dehydration 0.06
SRR5197907.htseq SRR5197907 WT RL3h rep1 heat stress 37C 3h GSM2467113 Leaf Heat stress 0.48
SRR8667485.htseq SRR8667485 cold stress 4oC 0h rep2 GSM3639337 Seedling Cold stress 0.10
SRR2302914.htseq SRR2302914 Col h1R heat stress 44oC 1h GSM1872392 Leaf Heat stress 0.07
SRR2932378.htseq SRR2932378 dehydration 3h rep1 GSM1936772 Seedling Dehydration 0.07
SRR4011032.htseq SRR4011032 Aluminium stress Col_4h GSM2264185 Root Aluminium stress 0.09
SRR9016748.htseq SRR9016748 cold stress 4oC 3h rep 1 GSM3752564 Seedling Cold stress 0.07
SRR7774146.htseq SRR7774146 heat stress 30oC 1h AM ZT 0.5 rep3 GSM3370071 Seedling Heat stress 0.15
SRR7774147.htseq SRR7774147 heat stress 30oC 1h AM ZT 0.5 rep4 GSM3370072 Seedling Heat stress 0.03
SRR7774150.htseq SRR7774150 heat stress 30oC 1h PM ZT 12.5 rep3 GSM3370075 Seedling Heat stress 0.23
SRR7774154.htseq SRR7774154 heat stress 30oC 1h AM ZT 0.5 and constant light GSM3370079 Seedling Heat stress 0.07
SRR9696664.htseq SRR9696664 Heat stress rep2 GSM3945673 Leaf Heat stress 0.03
SRR9696668.htseq SRR9696668 Heat stress rep3 GSM3945677 Leaf Heat stress 0.03
SRR7160930.htseq SRR7160930 osmotic stress r3 GSM3140730 Seedling Osmotic stress 0.09
SRR8666077.htseq SRR8666077 low water WT stress replicate 1 GSM3639178 Seedling Low water stress 0.16
SRR8666088.htseq SRR8666088 low water WT stress replicate 2 GSM3639182 Seedling Low water stress 0.06
SRR7659150.htseq SRR7659150 heat stress GSM3324329 Leaf Heat stress 0.27