Arabidopsis thaliana

mRNA: AT5G48550.1

ID: AT5G48550.1.TAIR10
Display: F-box associated ubiquitination effector family protein

DBxRefs: PACID:19670084

Gene: AT5G48550.TAIR10
Polypeptide: AT5G48550.1.TAIR10 F-box associated ubiquitination effector family protein

Location

Athaliana_Chr5:19678916..19680560 1

Assay source Assay name Assay description Biomaterial name Biomaterial description Treatment Score normalized (TPM)
SRR7367127.htseq SRR7367127 cold stress 10oC 1h ZT6 rep1 GSM3204844 Seedling Cold stress 0.79
SRR5196729.htseq SRR5196729 WT drought rep1 GSM2466002 Leaf Drought stress 0.38
SRR6427370.htseq SRR6427370 drought stress without water for 5 days rep1 GSM2906494 Whole plant Drought stress 0.26
SRR4033018.htseq SRR4033018 Heat stress rep1 GSM2280286 Leaf Heat stress 0.11
SRR5196730.htseq SRR5196730 WT drought rep1 GSM2466003 Leaf Drought stress 0.16
SRR6902931.htseq SRR6902931 low water WT stress replicate 1 GSM3068810 Seedling Low water stress 0.11
SRR6902958.htseq SRR6902958 low water WT stress replicate 3 GSM3068818 Seedling Low water stress 0.06
SRR6902945.htseq SRR6902945 low water WT stress replicate 2 GSM3068814 Seedling Low water stress 0.06
SRR4033020.htseq SRR4033020 Heat stress rep3 GSM2280288 Leaf Heat stress 0.08
SRR6902932.htseq SRR6902932 low water WT stress replicate 1 GSM3068810 Seedling Low water stress 0.05
SRR4033019.htseq SRR4033019 Heat stress rep2 GSM2280287 Leaf Heat stress 0.06
SRR6427371.htseq SRR6427371 drought stress without water for 5 days rep2 GSM2906495 Whole plant Drought stress 0.39
SRR5197908.htseq SRR5197908 WT RL3h rep2 heat stress 37C 3h GSM2467114 Leaf Heat stress 0.68
SRR6902946.htseq SRR6902946 low water WT stress replicate 2 GSM3068814 Seedling Low water stress 0.12
SRR6902944.htseq SRR6902944 low water WT stress replicate 2 GSM3068814 Seedling Low water stress 0.06
SRR7367129.htseq SRR7367129 cold stress 10oC 1h ZT6 rep2 GSM3204846 Seedling Cold stress 1.41
SRR7367136.htseq SRR7367136 heat stress 37oC 1h ZT6 rep2 GSM3204853 Seedling Heat stress 0.15
SRR7774145.htseq SRR7774145 heat stress 30oC 1h AM ZT 0.5 rep2 GSM3370070 Seedling Heat stress 0.09
SRR7774144.htseq SRR7774144 heat stress 30oC 1h AM ZT 0.5 rep1 GSM3370069 Seedling Heat stress 0.04
SRR9016750.htseq SRR9016750 cold stress 4oC 24h rep 1 GSM3752566 Seedling Cold stress 0.42
SRR9016747.htseq SRR9016747 cold stress 4oC 0h rep 2 GSM3752563 Seedling Cold stress 0.09
SRR9016746.htseq SRR9016746 cold stress 4oC 0h rep 1 GSM3752562 Seedling Cold stress 0.14
SRR5197909.htseq SRR5197909 WT RL3h rep3 heat stress 37C 3h GSM2467115 Leaf Heat stress 0.04
SRR8667487.htseq SRR8667487 cold stress 4oC 3h rep1 GSM3639339 Seedling Cold stress 0.93
SRR2302911.htseq SRR2302911 Col s1R salinity stress GSM1872389 Leaf Salinity stress 0.08
SRR2302916.htseq SRR2302916 Col h3R heat stress 44oC 1h GSM1872394 Leaf Heat stress 0.08
SRR8667489.htseq SRR8667489 cold stress 4oC 3h rep3 GSM3639341 Seedling Cold stress 0.82
SRR2302915.htseq SRR2302915 Col h2R heat stress 44oC 1h GSM1872393 Leaf Heat stress 0.17
SRR8667486.htseq SRR8667486 cold stress 4oC 0h rep3 GSM3639338 Seedling Cold stress 0.38
SRR2932377.htseq SRR2932377 dehydration 3h rep1 GSM1936771 Seedling Dehydration 0.06
SRR2302913.htseq SRR2302913 Col s3R salinity stress GSM1872391 Leaf Salinity stress 0.17
SRR5197907.htseq SRR5197907 WT RL3h rep1 heat stress 37C 3h GSM2467113 Leaf Heat stress 0.39
SRR8667488.htseq SRR8667488 cold stress 4oC 3h rep2 GSM3639340 Seedling Cold stress 0.83
SRR8667485.htseq SRR8667485 cold stress 4oC 0h rep2 GSM3639337 Seedling Cold stress 0.21
SRR5167847.htseq SRR5167847 WT dehydration1 GSM2453038 Leaf Dehydration 0.06
SRR2302914.htseq SRR2302914 Col h1R heat stress 44oC 1h GSM1872392 Leaf Heat stress 0.14
SRR2932378.htseq SRR2932378 dehydration 3h rep1 GSM1936772 Seedling Dehydration 0.05
SRR8667492.htseq SRR8667492 cold stress 4oC 24h rep2 GSM3639343 Seedling Cold stress 0.16
SRR8667490.htseq SRR8667490 cold stress 4oC 24h rep1 GSM3639342 Seedling Cold stress 0.06
SRR8667484.htseq SRR8667484 cold stress 4oC 0h rep1 GSM3639336 Seedling Cold stress 0.90
SRR2932379.htseq SRR2932379 dehydration 3h rep3 GSM1936773 Seedling Dehydration 0.04
SRR2302912.htseq SRR2302912 Col s2R salinity stress GSM1872390 Leaf Salinity stress 0.17
SRR4011032.htseq SRR4011032 Aluminium stress Col_4h GSM2264185 Root Aluminium stress 0.09
SRR9016748.htseq SRR9016748 cold stress 4oC 3h rep 1 GSM3752564 Seedling Cold stress 0.02
SRR8667493.htseq SRR8667493 cold stress 4oC 24h rep3 GSM3639344 Seedling Cold stress 0.02
SRR7774146.htseq SRR7774146 heat stress 30oC 1h AM ZT 0.5 rep3 GSM3370071 Seedling Heat stress 0.05
SRR7774147.htseq SRR7774147 heat stress 30oC 1h AM ZT 0.5 rep4 GSM3370072 Seedling Heat stress 0.03
SRR7774154.htseq SRR7774154 heat stress 30oC 1h AM ZT 0.5 and constant light GSM3370079 Seedling Heat stress 0.07
SRR8666077.htseq SRR8666077 low water WT stress replicate 1 GSM3639178 Seedling Low water stress 0.05
SRR8666089.htseq SRR8666089 low water WT stress replicate 2 GSM3639182 Seedling Low water stress 0.12
SRR8666087.htseq SRR8666087 low water WT stress replicate 2 GSM3639182 Seedling Low water stress 0.06
SRR7659148.htseq SRR7659148 heat stress GSM3324327 Leaf Heat stress 0.19
SRR8666076.htseq SRR8666076 low water WT stress replicate 1 GSM3639178 Seedling Low water stress 0.11
SRR7659149.htseq SRR7659149 heat stress GSM3324328 Leaf Heat stress 0.34
SRR8666101.htseq SRR8666101 low water WT stress replicate 3 GSM3639186 Seedling Low water stress 0.06
SRR8666088.htseq SRR8666088 low water WT stress replicate 2 GSM3639182 Seedling Low water stress 0.06
SRR7659150.htseq SRR7659150 heat stress GSM3324329 Leaf Heat stress 0.12