Arabidopsis thaliana

mRNA: AT5G18450.1

ID: AT5G18450.1.TAIR10
Display: Integrase-type DNA-binding superfamily protein

DBxRefs: PACID:19665260

Gene: AT5G18450.TAIR10
Polypeptide: AT5G18450.1.TAIR10 Integrase-type DNA-binding superfamily protein

Location

Athaliana_Chr5:6116096..6117020 -1

Assay source Assay name Assay description Biomaterial name Biomaterial description Treatment Score normalized (TPM)
SRR6902931.htseq SRR6902931 low water WT stress replicate 1 GSM3068810 Seedling Low water stress 0.11
SRR7367106.htseq SRR7367106 cold stress 10oC 1h ZT1 rep4 GSM3204823 Seedling Cold stress 0.21
SRR6902945.htseq SRR6902945 low water WT stress replicate 2 GSM3068814 Seedling Low water stress 0.12
SRR6902957.htseq SRR6902957 low water WT stress replicate 3 GSM3068818 Seedling Low water stress 0.25
SRR6427371.htseq SRR6427371 drought stress without water for 5 days rep2 GSM2906495 Whole plant Drought stress 0.05
SRR7367105.htseq SRR7367105 cold stress 10oC 1h ZT1 rep3 GSM3204822 Seedling Cold stress 0.29
SRR7367120.htseq SRR7367120 heat stress 37oC 1h ZT1 rep2 GSM3204837 Seedling Heat stress 2.25
SRR7405097.htseq SRR7405097 200 mM NaCl for 16 hrs Col_0_NaCl1 GSM3208265 Seedling Salinity stress 95.04
SRR7405104.htseq SRR7405104 200 mM NaCl for 16 hrs Col_0_NaCl3 GSM3208267 Seedling Salinity stress 69.56
SRR7367121.htseq SRR7367121 heat stress 37oC 1h ZT1 rep3 GSM3204838 Seedling Heat stress 1.85
SRR7405099.htseq SRR7405099 200 mM NaCl for 16 hrs Col_0_NaCl1 GSM3208265 Seedling Salinity stress 101.22
SRR7367129.htseq SRR7367129 cold stress 10oC 1h ZT6 rep2 GSM3204846 Seedling Cold stress 0.07
SRR7405102.htseq SRR7405102 200 mM NaCl for 16 hrs Col_0_NaCl2 GSM3208266 Seedling Salinity stress 85.92
SRR7367119.htseq SRR7367119 heat stress 37oC 1h ZT1 rep1 GSM3204836 Seedling Heat stress 2.44
SRR7405100.htseq SRR7405100 200 mM NaCl for 16 hrs Col_0_NaCl2 GSM3208266 Seedling Salinity stress 89.76
SRR7405101.htseq SRR7405101 200 mM NaCl for 16 hrs Col_0_NaCl2 GSM3208266 Seedling Salinity stress 89.63
SRR7367133.htseq SRR7367133 heat stress 37oC 1h ZT6 rep1 GSM3204850 Seedling Heat stress 0.56
SRR7405098.htseq SRR7405098 200 mM NaCl for 16 hrs Col_0_NaCl1 GSM3208265 Seedling Salinity stress 99.79
SRR7160928.htseq SRR7160928 osmotic stress r1 GSM3140728 Seedling Osmotic stress 0.11
SRR7367122.htseq SRR7367122 heat stress 37oC 1h ZT1 rep4 GSM3204839 Seedling Heat stress 2.61
SRR7405103.htseq SRR7405103 200 mM NaCl for 16 hrs Col_0_NaCl2 GSM3208266 Seedling Salinity stress 89.26
SRR7405106.htseq SRR7405106 200 mM NaCl for 16 hrs Col_0_NaCl3 GSM3208267 Seedling Salinity stress 70.03
SRR7405105.htseq SRR7405105 200 mM NaCl for 16 hrs Col_0_NaCl3 GSM3208267 Seedling Salinity stress 68.48
SRR7367136.htseq SRR7367136 heat stress 37oC 1h ZT6 rep2 GSM3204853 Seedling Heat stress 0.20
SRR7774145.htseq SRR7774145 heat stress 30oC 1h AM ZT 0.5 rep2 GSM3370070 Seedling Heat stress 0.03
SRR7405107.htseq SRR7405107 200 mM NaCl for 16 hrs Col_0_NaCl3 GSM3208267 Seedling Salinity stress 73.63
SRR7774148.htseq SRR7774148 heat stress 30oC 1h PM ZT 12.5 rep1 GSM3370073 Seedling Heat stress 0.04
SRR7405096.htseq SRR7405096 200 mM NaCl for 16 hrs Col_0_NaCl1 GSM3208265 Seedling Salinity stress 105.56
SRR2932377.htseq SRR2932377 dehydration 3h rep1 GSM1936771 Seedling Dehydration 0.02
SRR5167847.htseq SRR5167847 WT dehydration1 GSM2453038 Leaf Dehydration 0.03
SRR6902930.htseq SRR6902930 low water WT stress replicate 1 GSM3068810 Seedling Low water stress 0.43
SRR7774151.htseq SRR7774151 heat stress 30oC 1h PM ZT 12.5 rep4 GSM3370076 Seedling Heat stress 0.16
SRR7774154.htseq SRR7774154 heat stress 30oC 1h AM ZT 0.5 and constant light GSM3370079 Seedling Heat stress 0.14
SRR7779219.htseq SRR7779219 drought stress without water for 5 days rep1 GSM3373992 Root Drought stress 0.46
SRR7779220.htseq SRR7779220 drought stress without water for 5 days rep2 GSM3373993 Root Drought stress 0.14
SRR7779221.htseq SRR7779221 drought stress without water for 5 days rep3 GSM3373994 Root Drought stress 0.09
SRR7774155.htseq SRR7774155 heat stress 30oC 1h PM ZT 12.5 and constant light GSM3370080 Seedling Heat stress 0.11
SRR7774149.htseq SRR7774149 heat stress 30oC 1h PM ZT 12.5 rep2 GSM3370074 Seedling Heat stress 0.05
SRR9696668.htseq SRR9696668 Heat stress rep3 GSM3945677 Leaf Heat stress 0.03
SRR8666100.htseq SRR8666100 low water WT stress replicate 3 GSM3639186 Seedling Low water stress 0.25
SRR8666076.htseq SRR8666076 low water WT stress replicate 1 GSM3639178 Seedling Low water stress 0.11
SRR8666075.htseq SRR8666075 low water WT stress replicate 1 GSM3639178 Seedling Low water stress 0.43
SRR8666088.htseq SRR8666088 low water WT stress replicate 2 GSM3639182 Seedling Low water stress 0.12
SRR7659150.htseq SRR7659150 heat stress GSM3324329 Leaf Heat stress 0.08