Arabidopsis thaliana

mRNA: AT5G13600.1

ID: AT5G13600.1.TAIR10
Display: Phototropic-responsive NPH3 family protein

DBxRefs: PACID:19666978

Gene: AT5G13600.TAIR10
Polypeptide: AT5G13600.1.TAIR10 Phototropic-responsive NPH3 family protein

Location

Athaliana_Chr5:4380431..4382497 1

Assay source Assay name Assay description Biomaterial name Biomaterial description Treatment Score normalized (TPM)
SRR6902958.htseq SRR6902958 low water WT stress replicate 3 GSM3068818 Seedling Low water stress 0.06
SRR7367106.htseq SRR7367106 cold stress 10oC 1h ZT1 rep4 GSM3204823 Seedling Cold stress 0.10
SRR6902957.htseq SRR6902957 low water WT stress replicate 3 GSM3068818 Seedling Low water stress 0.19
SRR6902932.htseq SRR6902932 low water WT stress replicate 1 GSM3068810 Seedling Low water stress 0.16
SRR5197908.htseq SRR5197908 WT RL3h rep2 heat stress 37C 3h GSM2467114 Leaf Heat stress 0.04
SRR7405104.htseq SRR7405104 200 mM NaCl for 16 hrs Col_0_NaCl3 GSM3208267 Seedling Salinity stress 0.07
SRR6902956.htseq SRR6902956 low water WT stress replicate 3 GSM3068818 Seedling Low water stress 0.13
SRR6902944.htseq SRR6902944 low water WT stress replicate 2 GSM3068814 Seedling Low water stress 0.06
SRR7405099.htseq SRR7405099 200 mM NaCl for 16 hrs Col_0_NaCl1 GSM3208265 Seedling Salinity stress 0.19
SRR7405102.htseq SRR7405102 200 mM NaCl for 16 hrs Col_0_NaCl2 GSM3208266 Seedling Salinity stress 0.15
SRR7405098.htseq SRR7405098 200 mM NaCl for 16 hrs Col_0_NaCl1 GSM3208265 Seedling Salinity stress 0.08
SRR7160929.htseq SRR7160929 osmotic stress r2 GSM3140729 Seedling Osmotic stress 0.03
SRR7405096.htseq SRR7405096 200 mM NaCl for 16 hrs Col_0_NaCl1 GSM3208265 Seedling Salinity stress 0.08
SRR9016750.htseq SRR9016750 cold stress 4oC 24h rep 1 GSM3752566 Seedling Cold stress 0.06
SRR9016746.htseq SRR9016746 cold stress 4oC 0h rep 1 GSM3752562 Seedling Cold stress 0.03
SRR5197909.htseq SRR5197909 WT RL3h rep3 heat stress 37C 3h GSM2467115 Leaf Heat stress 0.04
SRR8667487.htseq SRR8667487 cold stress 4oC 3h rep1 GSM3639339 Seedling Cold stress 0.07
SRR8667489.htseq SRR8667489 cold stress 4oC 3h rep3 GSM3639341 Seedling Cold stress 0.09
SRR8667486.htseq SRR8667486 cold stress 4oC 0h rep3 GSM3639338 Seedling Cold stress 0.02
SRR2932377.htseq SRR2932377 dehydration 3h rep1 GSM1936771 Seedling Dehydration 0.02
SRR8667488.htseq SRR8667488 cold stress 4oC 3h rep2 GSM3639340 Seedling Cold stress 0.14
SRR8667485.htseq SRR8667485 cold stress 4oC 0h rep2 GSM3639337 Seedling Cold stress 0.03
SRR5167847.htseq SRR5167847 WT dehydration1 GSM2453038 Leaf Dehydration 0.03
SRR2302914.htseq SRR2302914 Col h1R heat stress 44oC 1h GSM1872392 Leaf Heat stress 0.07
SRR2932378.htseq SRR2932378 dehydration 3h rep1 GSM1936772 Seedling Dehydration 0.04
SRR2932379.htseq SRR2932379 dehydration 3h rep3 GSM1936773 Seedling Dehydration 0.07
SRR9016748.htseq SRR9016748 cold stress 4oC 3h rep 1 GSM3752564 Seedling Cold stress 0.02
SRR7774154.htseq SRR7774154 heat stress 30oC 1h AM ZT 0.5 and constant light GSM3370079 Seedling Heat stress 0.07
SRR9696667.htseq SRR9696667 Highlight stress rep1 GSM3945676 Leaf High light stress 0.03
SRR7160930.htseq SRR7160930 osmotic stress r3 GSM3140730 Seedling Osmotic stress 0.06
SRR8666077.htseq SRR8666077 low water WT stress replicate 1 GSM3639178 Seedling Low water stress 0.16
SRR8666100.htseq SRR8666100 low water WT stress replicate 3 GSM3639186 Seedling Low water stress 0.19
SRR8666087.htseq SRR8666087 low water WT stress replicate 2 GSM3639182 Seedling Low water stress 0.06
SRR7659148.htseq SRR7659148 heat stress GSM3324327 Leaf Heat stress 0.03
SRR8666099.htseq SRR8666099 low water WT stress replicate 3 GSM3639186 Seedling Low water stress 0.13
SRR8666101.htseq SRR8666101 low water WT stress replicate 3 GSM3639186 Seedling Low water stress 0.06
SRR7511617.htseq SRR7511617 cold stress 4oC 24h GSM3265402 Leaf Cold stress 0.02