Arabidopsis thaliana

mRNA: AT4G28800.1

ID: AT4G28800.1.TAIR10
Display: basic helix-loop-helix (bHLH) DNA-binding superfamily protein

DBxRefs: PACID:19645929

Gene: AT4G28800.TAIR10
Polypeptide: AT4G28800.1.TAIR10 basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Location

Athaliana_Chr4:14221969..14224075 1

Assay source Assay name Assay description Biomaterial name Biomaterial description Treatment Score normalized (TPM)
SRR4033020.htseq SRR4033020 Heat stress rep3 GSM2280288 Leaf Heat stress 0.04
SRR4033019.htseq SRR4033019 Heat stress rep2 GSM2280287 Leaf Heat stress 0.02
SRR7367105.htseq SRR7367105 cold stress 10oC 1h ZT1 rep3 GSM3204822 Seedling Cold stress 0.15
SRR7405097.htseq SRR7405097 200 mM NaCl for 16 hrs Col_0_NaCl1 GSM3208265 Seedling Salinity stress 1.72
SRR7405104.htseq SRR7405104 200 mM NaCl for 16 hrs Col_0_NaCl3 GSM3208267 Seedling Salinity stress 1.90
SRR6902944.htseq SRR6902944 low water WT stress replicate 2 GSM3068814 Seedling Low water stress 0.06
SRR7405099.htseq SRR7405099 200 mM NaCl for 16 hrs Col_0_NaCl1 GSM3208265 Seedling Salinity stress 0.95
SRR7405102.htseq SRR7405102 200 mM NaCl for 16 hrs Col_0_NaCl2 GSM3208266 Seedling Salinity stress 2.48
SRR7405100.htseq SRR7405100 200 mM NaCl for 16 hrs Col_0_NaCl2 GSM3208266 Seedling Salinity stress 2.25
SRR7405101.htseq SRR7405101 200 mM NaCl for 16 hrs Col_0_NaCl2 GSM3208266 Seedling Salinity stress 2.33
SRR7405098.htseq SRR7405098 200 mM NaCl for 16 hrs Col_0_NaCl1 GSM3208265 Seedling Salinity stress 2.12
SRR7160929.htseq SRR7160929 osmotic stress r2 GSM3140729 Seedling Osmotic stress 0.06
SRR7405103.htseq SRR7405103 200 mM NaCl for 16 hrs Col_0_NaCl2 GSM3208266 Seedling Salinity stress 2.34
SRR7405106.htseq SRR7405106 200 mM NaCl for 16 hrs Col_0_NaCl3 GSM3208267 Seedling Salinity stress 2.12
SRR7405105.htseq SRR7405105 200 mM NaCl for 16 hrs Col_0_NaCl3 GSM3208267 Seedling Salinity stress 3.60
SRR7774145.htseq SRR7774145 heat stress 30oC 1h AM ZT 0.5 rep2 GSM3370070 Seedling Heat stress 0.15
SRR7405107.htseq SRR7405107 200 mM NaCl for 16 hrs Col_0_NaCl3 GSM3208267 Seedling Salinity stress 2.26
SRR7774144.htseq SRR7774144 heat stress 30oC 1h AM ZT 0.5 rep1 GSM3370069 Seedling Heat stress 0.07
SRR7774148.htseq SRR7774148 heat stress 30oC 1h PM ZT 12.5 rep1 GSM3370073 Seedling Heat stress 0.02
SRR7405096.htseq SRR7405096 200 mM NaCl for 16 hrs Col_0_NaCl1 GSM3208265 Seedling Salinity stress 1.81
SRR9016747.htseq SRR9016747 cold stress 4oC 0h rep 2 GSM3752563 Seedling Cold stress 0.03
SRR5968352.htseq SRR5968352 WT heat stress 44oC GSM2752982 Seedling Heat stress 0.08
SRR9016751.htseq SRR9016751 cold stress 4oC 24h rep 2 GSM3752567 Seedling Cold stress 0.17
SRR8667491.htseq SRR8667491 cold stress 4oC 24h rep1 GSM3639342 Seedling Cold stress 0.09
SRR8667487.htseq SRR8667487 cold stress 4oC 3h rep1 GSM3639339 Seedling Cold stress 0.19
SRR8667489.htseq SRR8667489 cold stress 4oC 3h rep3 GSM3639341 Seedling Cold stress 0.21
SRR8667486.htseq SRR8667486 cold stress 4oC 0h rep3 GSM3639338 Seedling Cold stress 0.09
SRR2932377.htseq SRR2932377 dehydration 3h rep1 GSM1936771 Seedling Dehydration 0.04
SRR8667488.htseq SRR8667488 cold stress 4oC 3h rep2 GSM3639340 Seedling Cold stress 0.14
SRR8667485.htseq SRR8667485 cold stress 4oC 0h rep2 GSM3639337 Seedling Cold stress 0.10
SRR2932378.htseq SRR2932378 dehydration 3h rep1 GSM1936772 Seedling Dehydration 0.07
SRR8667492.htseq SRR8667492 cold stress 4oC 24h rep2 GSM3639343 Seedling Cold stress 0.33
SRR8667490.htseq SRR8667490 cold stress 4oC 24h rep1 GSM3639342 Seedling Cold stress 0.23
SRR8667484.htseq SRR8667484 cold stress 4oC 0h rep1 GSM3639336 Seedling Cold stress 0.03
SRR2932379.htseq SRR2932379 dehydration 3h rep3 GSM1936773 Seedling Dehydration 0.03
SRR9016748.htseq SRR9016748 cold stress 4oC 3h rep 1 GSM3752564 Seedling Cold stress 0.02
SRR8667493.htseq SRR8667493 cold stress 4oC 24h rep3 GSM3639344 Seedling Cold stress 0.05
SRR7774146.htseq SRR7774146 heat stress 30oC 1h AM ZT 0.5 rep3 GSM3370071 Seedling Heat stress 0.10
SRR7774147.htseq SRR7774147 heat stress 30oC 1h AM ZT 0.5 rep4 GSM3370072 Seedling Heat stress 0.26
SRR7774151.htseq SRR7774151 heat stress 30oC 1h PM ZT 12.5 rep4 GSM3370076 Seedling Heat stress 0.08
SRR7779219.htseq SRR7779219 drought stress without water for 5 days rep1 GSM3373992 Root Drought stress 0.09
SRR9696663.htseq SRR9696663 Highlight stress rep2 GSM3945672 Leaf High light stress 0.03
SRR9696668.htseq SRR9696668 Heat stress rep3 GSM3945677 Leaf Heat stress 0.25
SRR7160930.htseq SRR7160930 osmotic stress r3 GSM3140730 Seedling Osmotic stress 0.03
SRR8666087.htseq SRR8666087 low water WT stress replicate 2 GSM3639182 Seedling Low water stress 0.06