Arabidopsis thaliana

mRNA: AT4G01890.1

ID: AT4G01890.1.TAIR10
Display: Pectin lyase-like superfamily protein

DBxRefs: PACID:19646398

Gene: AT4G01890.TAIR10
Polypeptide: AT4G01890.1.TAIR10 Pectin lyase-like superfamily protein

Location

Athaliana_Chr4:816209..818428 1

Assay source Assay name Assay description Biomaterial name Biomaterial description Treatment Score normalized (TPM)
SRR7367127.htseq SRR7367127 cold stress 10oC 1h ZT6 rep1 GSM3204844 Seedling Cold stress 0.42
SRR4033018.htseq SRR4033018 Heat stress rep1 GSM2280286 Leaf Heat stress 0.02
SRR7367104.htseq SRR7367104 cold stress 10oC 1h ZT1 rep2 GSM3204821 Seedling Cold stress 0.56
SRR7367106.htseq SRR7367106 cold stress 10oC 1h ZT1 rep4 GSM3204823 Seedling Cold stress 0.42
SRR6902945.htseq SRR6902945 low water WT stress replicate 2 GSM3068814 Seedling Low water stress 0.06
SRR4033020.htseq SRR4033020 Heat stress rep3 GSM2280288 Leaf Heat stress 0.14
SRR6902932.htseq SRR6902932 low water WT stress replicate 1 GSM3068810 Seedling Low water stress 0.05
SRR7367105.htseq SRR7367105 cold stress 10oC 1h ZT1 rep3 GSM3204822 Seedling Cold stress 0.58
SRR7367129.htseq SRR7367129 cold stress 10oC 1h ZT6 rep2 GSM3204846 Seedling Cold stress 0.59
SRR7367133.htseq SRR7367133 heat stress 37oC 1h ZT6 rep1 GSM3204850 Seedling Heat stress 0.11
SRR7774148.htseq SRR7774148 heat stress 30oC 1h PM ZT 12.5 rep1 GSM3370073 Seedling Heat stress 0.04
SRR9016750.htseq SRR9016750 cold stress 4oC 24h rep 1 GSM3752566 Seedling Cold stress 0.11
SRR9016747.htseq SRR9016747 cold stress 4oC 0h rep 2 GSM3752563 Seedling Cold stress 0.11
SRR9016746.htseq SRR9016746 cold stress 4oC 0h rep 1 GSM3752562 Seedling Cold stress 0.19
SRR5968352.htseq SRR5968352 WT heat stress 44oC GSM2752982 Seedling Heat stress 0.04
SRR9016751.htseq SRR9016751 cold stress 4oC 24h rep 2 GSM3752567 Seedling Cold stress 0.06
SRR8667487.htseq SRR8667487 cold stress 4oC 3h rep1 GSM3639339 Seedling Cold stress 0.04
SRR2932377.htseq SRR2932377 dehydration 3h rep1 GSM1936771 Seedling Dehydration 0.04
SRR8667488.htseq SRR8667488 cold stress 4oC 3h rep2 GSM3639340 Seedling Cold stress 0.03
SRR6902930.htseq SRR6902930 low water WT stress replicate 1 GSM3068810 Seedling Low water stress 0.05
SRR2932378.htseq SRR2932378 dehydration 3h rep1 GSM1936772 Seedling Dehydration 0.03
SRR8667492.htseq SRR8667492 cold stress 4oC 24h rep2 GSM3639343 Seedling Cold stress 0.05
SRR8667484.htseq SRR8667484 cold stress 4oC 0h rep1 GSM3639336 Seedling Cold stress 0.12
SRR2932379.htseq SRR2932379 dehydration 3h rep3 GSM1936773 Seedling Dehydration 0.06
SRR9016748.htseq SRR9016748 cold stress 4oC 3h rep 1 GSM3752564 Seedling Cold stress 0.02
SRR7774147.htseq SRR7774147 heat stress 30oC 1h AM ZT 0.5 rep4 GSM3370072 Seedling Heat stress 0.03
SRR7774151.htseq SRR7774151 heat stress 30oC 1h PM ZT 12.5 rep4 GSM3370076 Seedling Heat stress 0.04
SRR7779219.htseq SRR7779219 drought stress without water for 5 days rep1 GSM3373992 Root Drought stress 2.32
SRR7779220.htseq SRR7779220 drought stress without water for 5 days rep2 GSM3373993 Root Drought stress 1.17
SRR7779221.htseq SRR7779221 drought stress without water for 5 days rep3 GSM3373994 Root Drought stress 1.74
SRR9696659.htseq SRR9696659 Highlight stress rep1 GSM3945668 Leaf High light stress 0.03
SRR7160930.htseq SRR7160930 osmotic stress r3 GSM3140730 Seedling Osmotic stress 0.03
SRR8666077.htseq SRR8666077 low water WT stress replicate 1 GSM3639178 Seedling Low water stress 0.05
SRR8666075.htseq SRR8666075 low water WT stress replicate 1 GSM3639178 Seedling Low water stress 0.05
SRR8666088.htseq SRR8666088 low water WT stress replicate 2 GSM3639182 Seedling Low water stress 0.06
SRR7659150.htseq SRR7659150 heat stress GSM3324329 Leaf Heat stress 0.19