Arabidopsis thaliana

mRNA: AT3G53460.3

ID: AT3G53460.3.TAIR10
Display: chloroplast RNA-binding protein 29

DBxRefs: PACID:19665068

Gene: AT3G53460.TAIR10
Polypeptide: AT3G53460.3.TAIR10 chloroplast RNA-binding protein 29

Location

Athaliana_Chr3:19819184..19821519 -1

Assay source Assay name Assay description Biomaterial name Biomaterial description Treatment Score normalized (TPM)
SRR7367127.htseq SRR7367127 cold stress 10oC 1h ZT6 rep1 GSM3204844 Seedling Cold stress 176.86
SRR5196729.htseq SRR5196729 WT drought rep1 GSM2466002 Leaf Drought stress 797.51
SRR6427370.htseq SRR6427370 drought stress without water for 5 days rep1 GSM2906494 Whole plant Drought stress 708.81
SRR4033018.htseq SRR4033018 Heat stress rep1 GSM2280286 Leaf Heat stress 259.69
SRR7367104.htseq SRR7367104 cold stress 10oC 1h ZT1 rep2 GSM3204821 Seedling Cold stress 605.09
SRR5196730.htseq SRR5196730 WT drought rep1 GSM2466003 Leaf Drought stress 730.99
SRR6902931.htseq SRR6902931 low water WT stress replicate 1 GSM3068810 Seedling Low water stress 381.55
SRR6902958.htseq SRR6902958 low water WT stress replicate 3 GSM3068818 Seedling Low water stress 401.58
SRR6359065.htseq SRR6359065 heat stress 43oC GSM2881006 Root Heat stress 98.99
SRR7367106.htseq SRR7367106 cold stress 10oC 1h ZT1 rep4 GSM3204823 Seedling Cold stress 451.04
SRR6902945.htseq SRR6902945 low water WT stress replicate 2 GSM3068814 Seedling Low water stress 369.09
SRR6902957.htseq SRR6902957 low water WT stress replicate 3 GSM3068818 Seedling Low water stress 394.32
SRR6048929.htseq SRR6048929 cold stress 4oC GSM2786977 Whole plant Cold stress 2,149.63
SRR4033020.htseq SRR4033020 Heat stress rep3 GSM2280288 Leaf Heat stress 170.35
SRR6902932.htseq SRR6902932 low water WT stress replicate 1 GSM3068810 Seedling Low water stress 373.25
SRR4033019.htseq SRR4033019 Heat stress rep2 GSM2280287 Leaf Heat stress 204.99
SRR6427371.htseq SRR6427371 drought stress without water for 5 days rep2 GSM2906495 Whole plant Drought stress 783.98
SRR7367105.htseq SRR7367105 cold stress 10oC 1h ZT1 rep3 GSM3204822 Seedling Cold stress 499.95
SRR5197908.htseq SRR5197908 WT RL3h rep2 heat stress 37C 3h GSM2467114 Leaf Heat stress 333.64
SRR7367120.htseq SRR7367120 heat stress 37oC 1h ZT1 rep2 GSM3204837 Seedling Heat stress 78.77
SRR7405097.htseq SRR7405097 200 mM NaCl for 16 hrs Col_0_NaCl1 GSM3208265 Seedling Salinity stress 1,043.43
SRR6902946.htseq SRR6902946 low water WT stress replicate 2 GSM3068814 Seedling Low water stress 362.95
SRR7405104.htseq SRR7405104 200 mM NaCl for 16 hrs Col_0_NaCl3 GSM3208267 Seedling Salinity stress 1,063.66
SRR6902956.htseq SRR6902956 low water WT stress replicate 3 GSM3068818 Seedling Low water stress 394.72
SRR6902944.htseq SRR6902944 low water WT stress replicate 2 GSM3068814 Seedling Low water stress 353.59
SRR7367121.htseq SRR7367121 heat stress 37oC 1h ZT1 rep3 GSM3204838 Seedling Heat stress 106.22
SRR7405099.htseq SRR7405099 200 mM NaCl for 16 hrs Col_0_NaCl1 GSM3208265 Seedling Salinity stress 1,004.02
SRR7367129.htseq SRR7367129 cold stress 10oC 1h ZT6 rep2 GSM3204846 Seedling Cold stress 232.85
SRR6359066.htseq SRR6359066 heat stress 43oC GSM2881007 Root Heat stress 63.57
SRR7405102.htseq SRR7405102 200 mM NaCl for 16 hrs Col_0_NaCl2 GSM3208266 Seedling Salinity stress 940.50
SRR7367119.htseq SRR7367119 heat stress 37oC 1h ZT1 rep1 GSM3204836 Seedling Heat stress 100.58
SRR7405100.htseq SRR7405100 200 mM NaCl for 16 hrs Col_0_NaCl2 GSM3208266 Seedling Salinity stress 952.36
SRR7405101.htseq SRR7405101 200 mM NaCl for 16 hrs Col_0_NaCl2 GSM3208266 Seedling Salinity stress 954.64
SRR7367133.htseq SRR7367133 heat stress 37oC 1h ZT6 rep1 GSM3204850 Seedling Heat stress 522.62
SRR7405098.htseq SRR7405098 200 mM NaCl for 16 hrs Col_0_NaCl1 GSM3208265 Seedling Salinity stress 1,013.01
SRR7160928.htseq SRR7160928 osmotic stress r1 GSM3140728 Seedling Osmotic stress 337.84
SRR7367122.htseq SRR7367122 heat stress 37oC 1h ZT1 rep4 GSM3204839 Seedling Heat stress 117.05
SRR7160929.htseq SRR7160929 osmotic stress r2 GSM3140729 Seedling Osmotic stress 297.53
SRR7405103.htseq SRR7405103 200 mM NaCl for 16 hrs Col_0_NaCl2 GSM3208266 Seedling Salinity stress 935.39
SRR7405106.htseq SRR7405106 200 mM NaCl for 16 hrs Col_0_NaCl3 GSM3208267 Seedling Salinity stress 1,064.25
SRR7405105.htseq SRR7405105 200 mM NaCl for 16 hrs Col_0_NaCl3 GSM3208267 Seedling Salinity stress 1,055.14
SRR7367136.htseq SRR7367136 heat stress 37oC 1h ZT6 rep2 GSM3204853 Seedling Heat stress 508.72
SRR7774145.htseq SRR7774145 heat stress 30oC 1h AM ZT 0.5 rep2 GSM3370070 Seedling Heat stress 144.72
SRR7405107.htseq SRR7405107 200 mM NaCl for 16 hrs Col_0_NaCl3 GSM3208267 Seedling Salinity stress 1,082.09
SRR7774144.htseq SRR7774144 heat stress 30oC 1h AM ZT 0.5 rep1 GSM3370069 Seedling Heat stress 125.62
SRR7774148.htseq SRR7774148 heat stress 30oC 1h PM ZT 12.5 rep1 GSM3370073 Seedling Heat stress 1,061.61
SRR7405096.htseq SRR7405096 200 mM NaCl for 16 hrs Col_0_NaCl1 GSM3208265 Seedling Salinity stress 1,024.54
SRR9016750.htseq SRR9016750 cold stress 4oC 24h rep 1 GSM3752566 Seedling Cold stress 573.71
SRR9016747.htseq SRR9016747 cold stress 4oC 0h rep 2 GSM3752563 Seedling Cold stress 383.95
SRR9016746.htseq SRR9016746 cold stress 4oC 0h rep 1 GSM3752562 Seedling Cold stress 343.73
SRR5167849.htseq SRR5167849 WT dehydration3 GSM2453040 Leaf Dehydration 194.23
SRR5968352.htseq SRR5968352 WT heat stress 44oC GSM2752982 Seedling Heat stress 578.36
SRR9016751.htseq SRR9016751 cold stress 4oC 24h rep 2 GSM3752567 Seedling Cold stress 457.51
SRR8667491.htseq SRR8667491 cold stress 4oC 24h rep1 GSM3639342 Seedling Cold stress 875.88
SRR5197909.htseq SRR5197909 WT RL3h rep3 heat stress 37C 3h GSM2467115 Leaf Heat stress 340.13
SRR8667487.htseq SRR8667487 cold stress 4oC 3h rep1 GSM3639339 Seedling Cold stress 1,000.69
SRR2302911.htseq SRR2302911 Col s1R salinity stress GSM1872389 Leaf Salinity stress 1,386.87
SRR2302916.htseq SRR2302916 Col h3R heat stress 44oC 1h GSM1872394 Leaf Heat stress 624.79
SRR8667489.htseq SRR8667489 cold stress 4oC 3h rep3 GSM3639341 Seedling Cold stress 974.26
SRR2302915.htseq SRR2302915 Col h2R heat stress 44oC 1h GSM1872393 Leaf Heat stress 615.92
SRR8667486.htseq SRR8667486 cold stress 4oC 0h rep3 GSM3639338 Seedling Cold stress 616.85
SRR2932377.htseq SRR2932377 dehydration 3h rep1 GSM1936771 Seedling Dehydration 649.48
SRR2302913.htseq SRR2302913 Col s3R salinity stress GSM1872391 Leaf Salinity stress 1,462.69
SRR5197907.htseq SRR5197907 WT RL3h rep1 heat stress 37C 3h GSM2467113 Leaf Heat stress 778.56
SRR8667488.htseq SRR8667488 cold stress 4oC 3h rep2 GSM3639340 Seedling Cold stress 888.29
SRR8667485.htseq SRR8667485 cold stress 4oC 0h rep2 GSM3639337 Seedling Cold stress 549.22
SRR6048928.htseq SRR6048928 cold stress 4oC GSM2786977 Whole plant Cold stress 2,127.38
SRR5167847.htseq SRR5167847 WT dehydration1 GSM2453038 Leaf Dehydration 275.72
SRR6902930.htseq SRR6902930 low water WT stress replicate 1 GSM3068810 Seedling Low water stress 392.69
SRR2302914.htseq SRR2302914 Col h1R heat stress 44oC 1h GSM1872392 Leaf Heat stress 592.11
SRR2932378.htseq SRR2932378 dehydration 3h rep1 GSM1936772 Seedling Dehydration 637.71
SRR8667492.htseq SRR8667492 cold stress 4oC 24h rep2 GSM3639343 Seedling Cold stress 734.61
SRR8667490.htseq SRR8667490 cold stress 4oC 24h rep1 GSM3639342 Seedling Cold stress 820.64
SRR8667484.htseq SRR8667484 cold stress 4oC 0h rep1 GSM3639336 Seedling Cold stress 626.67
SRR2932379.htseq SRR2932379 dehydration 3h rep3 GSM1936773 Seedling Dehydration 716.61
SRR2302912.htseq SRR2302912 Col s2R salinity stress GSM1872390 Leaf Salinity stress 1,346.82
SRR4011032.htseq SRR4011032 Aluminium stress Col_4h GSM2264185 Root Aluminium stress 54.98
SRR5167848.htseq SRR5167848 WT dehydration2 GSM2453039 Leaf Dehydration 222.81
SRR9016748.htseq SRR9016748 cold stress 4oC 3h rep 1 GSM3752564 Seedling Cold stress 985.93
SRR8667493.htseq SRR8667493 cold stress 4oC 24h rep3 GSM3639344 Seedling Cold stress 711.34
SRR7774146.htseq SRR7774146 heat stress 30oC 1h AM ZT 0.5 rep3 GSM3370071 Seedling Heat stress 115.98
SRR7774147.htseq SRR7774147 heat stress 30oC 1h AM ZT 0.5 rep4 GSM3370072 Seedling Heat stress 126.26
SRR7774150.htseq SRR7774150 heat stress 30oC 1h PM ZT 12.5 rep3 GSM3370075 Seedling Heat stress 1,187.05
SRR7774151.htseq SRR7774151 heat stress 30oC 1h PM ZT 12.5 rep4 GSM3370076 Seedling Heat stress 986.00
SRR7774154.htseq SRR7774154 heat stress 30oC 1h AM ZT 0.5 and constant light GSM3370079 Seedling Heat stress 157.25
SRR7779219.htseq SRR7779219 drought stress without water for 5 days rep1 GSM3373992 Root Drought stress 51.53
SRR7779220.htseq SRR7779220 drought stress without water for 5 days rep2 GSM3373993 Root Drought stress 46.26
SRR7779221.htseq SRR7779221 drought stress without water for 5 days rep3 GSM3373994 Root Drought stress 36.28
SRR9696659.htseq SRR9696659 Highlight stress rep1 GSM3945668 Leaf High light stress 1,209.73
SRR9696660.htseq SRR9696660 Heat stress rep1 GSM3945669 Leaf Heat stress 475.02
SRR9696663.htseq SRR9696663 Highlight stress rep2 GSM3945672 Leaf High light stress 1,067.04
SRR9696664.htseq SRR9696664 Heat stress rep2 GSM3945673 Leaf Heat stress 644.78
SRR7774155.htseq SRR7774155 heat stress 30oC 1h PM ZT 12.5 and constant light GSM3370080 Seedling Heat stress 757.75
SRR7774149.htseq SRR7774149 heat stress 30oC 1h PM ZT 12.5 rep2 GSM3370074 Seedling Heat stress 1,298.47
SRR9696667.htseq SRR9696667 Highlight stress rep1 GSM3945676 Leaf High light stress 1,204.68
SRR9696668.htseq SRR9696668 Heat stress rep3 GSM3945677 Leaf Heat stress 492.90
SRR7160930.htseq SRR7160930 osmotic stress r3 GSM3140730 Seedling Osmotic stress 303.62
SRR8666077.htseq SRR8666077 low water WT stress replicate 1 GSM3639178 Seedling Low water stress 373.25
SRR8666089.htseq SRR8666089 low water WT stress replicate 2 GSM3639182 Seedling Low water stress 362.95
SRR8666100.htseq SRR8666100 low water WT stress replicate 3 GSM3639186 Seedling Low water stress 394.32
SRR8666087.htseq SRR8666087 low water WT stress replicate 2 GSM3639182 Seedling Low water stress 353.59
SRR7659148.htseq SRR7659148 heat stress GSM3324327 Leaf Heat stress 319.63
SRR8666076.htseq SRR8666076 low water WT stress replicate 1 GSM3639178 Seedling Low water stress 381.55
SRR8666075.htseq SRR8666075 low water WT stress replicate 1 GSM3639178 Seedling Low water stress 392.69
SRR7659149.htseq SRR7659149 heat stress GSM3324328 Leaf Heat stress 339.98
SRR8666099.htseq SRR8666099 low water WT stress replicate 3 GSM3639186 Seedling Low water stress 394.72
SRR8666101.htseq SRR8666101 low water WT stress replicate 3 GSM3639186 Seedling Low water stress 401.58
SRR7511617.htseq SRR7511617 cold stress 4oC 24h GSM3265402 Leaf Cold stress 1,070.56
SRR8666088.htseq SRR8666088 low water WT stress replicate 2 GSM3639182 Seedling Low water stress 369.09
SRR7659150.htseq SRR7659150 heat stress GSM3324329 Leaf Heat stress 472.64