Arabidopsis thaliana

mRNA: AT3G13140.1

ID: AT3G13140.1.TAIR10
Display: hydroxyproline-rich glycoprotein family protein

DBxRefs: PACID:19662646

Gene: AT3G13140.TAIR10
Polypeptide: AT3G13140.1.TAIR10 hydroxyproline-rich glycoprotein family protein

Location

Athaliana_Chr3:4226653..4227377 -1

Assay source Assay name Assay description Biomaterial name Biomaterial description Treatment Score normalized (TPM)
SRR7367127.htseq SRR7367127 cold stress 10oC 1h ZT6 rep1 GSM3204844 Seedling Cold stress 0.16
SRR6427370.htseq SRR6427370 drought stress without water for 5 days rep1 GSM2906494 Whole plant Drought stress 0.05
SRR6902931.htseq SRR6902931 low water WT stress replicate 1 GSM3068810 Seedling Low water stress 0.38
SRR6902958.htseq SRR6902958 low water WT stress replicate 3 GSM3068818 Seedling Low water stress 0.62
SRR7367106.htseq SRR7367106 cold stress 10oC 1h ZT1 rep4 GSM3204823 Seedling Cold stress 0.31
SRR6902945.htseq SRR6902945 low water WT stress replicate 2 GSM3068814 Seedling Low water stress 0.74
SRR6902946.htseq SRR6902946 low water WT stress replicate 2 GSM3068814 Seedling Low water stress 0.19
SRR6902956.htseq SRR6902956 low water WT stress replicate 3 GSM3068818 Seedling Low water stress 0.88
SRR6902944.htseq SRR6902944 low water WT stress replicate 2 GSM3068814 Seedling Low water stress 0.31
SRR7405099.htseq SRR7405099 200 mM NaCl for 16 hrs Col_0_NaCl1 GSM3208265 Seedling Salinity stress 0.19
SRR6359066.htseq SRR6359066 heat stress 43oC GSM2881007 Root Heat stress 0.19
SRR7405100.htseq SRR7405100 200 mM NaCl for 16 hrs Col_0_NaCl2 GSM3208266 Seedling Salinity stress 0.08
SRR7160928.htseq SRR7160928 osmotic stress r1 GSM3140728 Seedling Osmotic stress 0.39
SRR7160929.htseq SRR7160929 osmotic stress r2 GSM3140729 Seedling Osmotic stress 0.30
SRR7774145.htseq SRR7774145 heat stress 30oC 1h AM ZT 0.5 rep2 GSM3370070 Seedling Heat stress 0.03
SRR7405096.htseq SRR7405096 200 mM NaCl for 16 hrs Col_0_NaCl1 GSM3208265 Seedling Salinity stress 0.08
SRR9016747.htseq SRR9016747 cold stress 4oC 0h rep 2 GSM3752563 Seedling Cold stress 0.09
SRR5167849.htseq SRR5167849 WT dehydration3 GSM2453040 Leaf Dehydration 0.03
SRR5968352.htseq SRR5968352 WT heat stress 44oC GSM2752982 Seedling Heat stress 0.12
SRR9016751.htseq SRR9016751 cold stress 4oC 24h rep 2 GSM3752567 Seedling Cold stress 0.21
SRR8667491.htseq SRR8667491 cold stress 4oC 24h rep1 GSM3639342 Seedling Cold stress 0.14
SRR8667487.htseq SRR8667487 cold stress 4oC 3h rep1 GSM3639339 Seedling Cold stress 0.11
SRR2302911.htseq SRR2302911 Col s1R salinity stress GSM1872389 Leaf Salinity stress 0.08
SRR8667486.htseq SRR8667486 cold stress 4oC 0h rep3 GSM3639338 Seedling Cold stress 0.07
SRR2932377.htseq SRR2932377 dehydration 3h rep1 GSM1936771 Seedling Dehydration 0.06
SRR8667488.htseq SRR8667488 cold stress 4oC 3h rep2 GSM3639340 Seedling Cold stress 0.26
SRR6048928.htseq SRR6048928 cold stress 4oC GSM2786977 Whole plant Cold stress 0.05
SRR5167847.htseq SRR5167847 WT dehydration1 GSM2453038 Leaf Dehydration 0.03
SRR6902930.htseq SRR6902930 low water WT stress replicate 1 GSM3068810 Seedling Low water stress 0.16
SRR2932378.htseq SRR2932378 dehydration 3h rep1 GSM1936772 Seedling Dehydration 0.12
SRR8667492.htseq SRR8667492 cold stress 4oC 24h rep2 GSM3639343 Seedling Cold stress 0.19
SRR8667490.htseq SRR8667490 cold stress 4oC 24h rep1 GSM3639342 Seedling Cold stress 0.28
SRR8667484.htseq SRR8667484 cold stress 4oC 0h rep1 GSM3639336 Seedling Cold stress 0.20
SRR2932379.htseq SRR2932379 dehydration 3h rep3 GSM1936773 Seedling Dehydration 0.13
SRR4011032.htseq SRR4011032 Aluminium stress Col_4h GSM2264185 Root Aluminium stress 0.60
SRR5167848.htseq SRR5167848 WT dehydration2 GSM2453039 Leaf Dehydration 0.14
SRR9016748.htseq SRR9016748 cold stress 4oC 3h rep 1 GSM3752564 Seedling Cold stress 0.07
SRR8667493.htseq SRR8667493 cold stress 4oC 24h rep3 GSM3639344 Seedling Cold stress 0.07
SRR7774146.htseq SRR7774146 heat stress 30oC 1h AM ZT 0.5 rep3 GSM3370071 Seedling Heat stress 0.05
SRR7774147.htseq SRR7774147 heat stress 30oC 1h AM ZT 0.5 rep4 GSM3370072 Seedling Heat stress 0.03
SRR7779219.htseq SRR7779219 drought stress without water for 5 days rep1 GSM3373992 Root Drought stress 0.74
SRR7779220.htseq SRR7779220 drought stress without water for 5 days rep2 GSM3373993 Root Drought stress 0.65
SRR7779221.htseq SRR7779221 drought stress without water for 5 days rep3 GSM3373994 Root Drought stress 0.47
SRR9696660.htseq SRR9696660 Heat stress rep1 GSM3945669 Leaf Heat stress 0.08
SRR9696663.htseq SRR9696663 Highlight stress rep2 GSM3945672 Leaf High light stress 0.08
SRR7774155.htseq SRR7774155 heat stress 30oC 1h PM ZT 12.5 and constant light GSM3370080 Seedling Heat stress 0.11
SRR7774149.htseq SRR7774149 heat stress 30oC 1h PM ZT 12.5 rep2 GSM3370074 Seedling Heat stress 0.05
SRR7160930.htseq SRR7160930 osmotic stress r3 GSM3140730 Seedling Osmotic stress 0.21
SRR8666089.htseq SRR8666089 low water WT stress replicate 2 GSM3639182 Seedling Low water stress 0.19
SRR8666087.htseq SRR8666087 low water WT stress replicate 2 GSM3639182 Seedling Low water stress 0.31
SRR8666076.htseq SRR8666076 low water WT stress replicate 1 GSM3639178 Seedling Low water stress 0.38
SRR8666075.htseq SRR8666075 low water WT stress replicate 1 GSM3639178 Seedling Low water stress 0.16
SRR8666099.htseq SRR8666099 low water WT stress replicate 3 GSM3639186 Seedling Low water stress 0.88
SRR8666101.htseq SRR8666101 low water WT stress replicate 3 GSM3639186 Seedling Low water stress 0.62
SRR7511617.htseq SRR7511617 cold stress 4oC 24h GSM3265402 Leaf Cold stress 0.29
SRR8666088.htseq SRR8666088 low water WT stress replicate 2 GSM3639182 Seedling Low water stress 0.74
SRR7659150.htseq SRR7659150 heat stress GSM3324329 Leaf Heat stress 0.46