Arabidopsis thaliana

mRNA: AT2G27940.1

ID: AT2G27940.1.TAIR10
Display: RING/U-box superfamily protein

DBxRefs: PACID:19642600

Gene: AT2G27940.TAIR10
Polypeptide: AT2G27940.1.TAIR10 RING/U-box superfamily protein

Location

Athaliana_Chr2:11897941..11898867 1

Assay source Assay name Assay description Biomaterial name Biomaterial description Treatment Score normalized (TPM)
SRR5196730.htseq SRR5196730 WT drought rep1 GSM2466003 Leaf Drought stress 0.11
SRR6048929.htseq SRR6048929 cold stress 4oC GSM2786977 Whole plant Cold stress 0.32
SRR7405097.htseq SRR7405097 200 mM NaCl for 16 hrs Col_0_NaCl1 GSM3208265 Seedling Salinity stress 12.02
SRR7405104.htseq SRR7405104 200 mM NaCl for 16 hrs Col_0_NaCl3 GSM3208267 Seedling Salinity stress 9.74
SRR7405099.htseq SRR7405099 200 mM NaCl for 16 hrs Col_0_NaCl1 GSM3208265 Seedling Salinity stress 14.32
SRR7405102.htseq SRR7405102 200 mM NaCl for 16 hrs Col_0_NaCl2 GSM3208266 Seedling Salinity stress 9.92
SRR7405100.htseq SRR7405100 200 mM NaCl for 16 hrs Col_0_NaCl2 GSM3208266 Seedling Salinity stress 10.65
SRR7405101.htseq SRR7405101 200 mM NaCl for 16 hrs Col_0_NaCl2 GSM3208266 Seedling Salinity stress 5.13
SRR7367133.htseq SRR7367133 heat stress 37oC 1h ZT6 rep1 GSM3204850 Seedling Heat stress 0.06
SRR7405098.htseq SRR7405098 200 mM NaCl for 16 hrs Col_0_NaCl1 GSM3208265 Seedling Salinity stress 12.90
SRR7160929.htseq SRR7160929 osmotic stress r2 GSM3140729 Seedling Osmotic stress 0.42
SRR7405103.htseq SRR7405103 200 mM NaCl for 16 hrs Col_0_NaCl2 GSM3208266 Seedling Salinity stress 7.52
SRR7405106.htseq SRR7405106 200 mM NaCl for 16 hrs Col_0_NaCl3 GSM3208267 Seedling Salinity stress 11.39
SRR7405105.htseq SRR7405105 200 mM NaCl for 16 hrs Col_0_NaCl3 GSM3208267 Seedling Salinity stress 11.26
SRR7405107.htseq SRR7405107 200 mM NaCl for 16 hrs Col_0_NaCl3 GSM3208267 Seedling Salinity stress 15.08
SRR7774148.htseq SRR7774148 heat stress 30oC 1h PM ZT 12.5 rep1 GSM3370073 Seedling Heat stress 0.02
SRR7405096.htseq SRR7405096 200 mM NaCl for 16 hrs Col_0_NaCl1 GSM3208265 Seedling Salinity stress 15.68
SRR9016746.htseq SRR9016746 cold stress 4oC 0h rep 1 GSM3752562 Seedling Cold stress 0.06
SRR9016751.htseq SRR9016751 cold stress 4oC 24h rep 2 GSM3752567 Seedling Cold stress 0.04
SRR8667491.htseq SRR8667491 cold stress 4oC 24h rep1 GSM3639342 Seedling Cold stress 0.09
SRR2302911.htseq SRR2302911 Col s1R salinity stress GSM1872389 Leaf Salinity stress 0.08
SRR2932377.htseq SRR2932377 dehydration 3h rep1 GSM1936771 Seedling Dehydration 0.02
SRR8667488.htseq SRR8667488 cold stress 4oC 3h rep2 GSM3639340 Seedling Cold stress 0.03
SRR6048928.htseq SRR6048928 cold stress 4oC GSM2786977 Whole plant Cold stress 0.09
SRR2932378.htseq SRR2932378 dehydration 3h rep1 GSM1936772 Seedling Dehydration 0.12
SRR8667484.htseq SRR8667484 cold stress 4oC 0h rep1 GSM3639336 Seedling Cold stress 0.06
SRR2932379.htseq SRR2932379 dehydration 3h rep3 GSM1936773 Seedling Dehydration 0.20
SRR7774154.htseq SRR7774154 heat stress 30oC 1h AM ZT 0.5 and constant light GSM3370079 Seedling Heat stress 0.07
SRR7779219.htseq SRR7779219 drought stress without water for 5 days rep1 GSM3373992 Root Drought stress 0.19
SRR7779221.htseq SRR7779221 drought stress without water for 5 days rep3 GSM3373994 Root Drought stress 0.05
SRR9696663.htseq SRR9696663 Highlight stress rep2 GSM3945672 Leaf High light stress 0.03
SRR9696664.htseq SRR9696664 Heat stress rep2 GSM3945673 Leaf Heat stress 0.05
SRR9696667.htseq SRR9696667 Highlight stress rep1 GSM3945676 Leaf High light stress 0.03
SRR9696668.htseq SRR9696668 Heat stress rep3 GSM3945677 Leaf Heat stress 0.11
SRR7160930.htseq SRR7160930 osmotic stress r3 GSM3140730 Seedling Osmotic stress 0.15