Arabidopsis thaliana

mRNA: AT1G12610.1

ID: AT1G12610.1.TAIR10
Display: Integrase-type DNA-binding superfamily protein

DBxRefs: PACID:19654912

Gene: AT1G12610.TAIR10
Polypeptide: AT1G12610.1.TAIR10 Integrase-type DNA-binding superfamily protein

Location

Athaliana_Chr1:4289943..4291017 -1

Assay source Assay name Assay description Biomaterial name Biomaterial description Treatment Score normalized (TPM)
SRR7367127.htseq SRR7367127 cold stress 10oC 1h ZT6 rep1 GSM3204844 Seedling Cold stress 0.58
SRR5196729.htseq SRR5196729 WT drought rep1 GSM2466002 Leaf Drought stress 3.98
SRR6427370.htseq SRR6427370 drought stress without water for 5 days rep1 GSM2906494 Whole plant Drought stress 0.16
SRR4033018.htseq SRR4033018 Heat stress rep1 GSM2280286 Leaf Heat stress 0.06
SRR5196730.htseq SRR5196730 WT drought rep1 GSM2466003 Leaf Drought stress 6.38
SRR4033020.htseq SRR4033020 Heat stress rep3 GSM2280288 Leaf Heat stress 0.18
SRR4033019.htseq SRR4033019 Heat stress rep2 GSM2280287 Leaf Heat stress 0.36
SRR6427371.htseq SRR6427371 drought stress without water for 5 days rep2 GSM2906495 Whole plant Drought stress 2.27
SRR7367105.htseq SRR7367105 cold stress 10oC 1h ZT1 rep3 GSM3204822 Seedling Cold stress 0.44
SRR5197908.htseq SRR5197908 WT RL3h rep2 heat stress 37C 3h GSM2467114 Leaf Heat stress 0.24
SRR7405097.htseq SRR7405097 200 mM NaCl for 16 hrs Col_0_NaCl1 GSM3208265 Seedling Salinity stress 0.29
SRR7405104.htseq SRR7405104 200 mM NaCl for 16 hrs Col_0_NaCl3 GSM3208267 Seedling Salinity stress 0.51
SRR7405099.htseq SRR7405099 200 mM NaCl for 16 hrs Col_0_NaCl1 GSM3208265 Seedling Salinity stress 0.76
SRR7367129.htseq SRR7367129 cold stress 10oC 1h ZT6 rep2 GSM3204846 Seedling Cold stress 1.48
SRR7405102.htseq SRR7405102 200 mM NaCl for 16 hrs Col_0_NaCl2 GSM3208266 Seedling Salinity stress 0.31
SRR7405100.htseq SRR7405100 200 mM NaCl for 16 hrs Col_0_NaCl2 GSM3208266 Seedling Salinity stress 0.47
SRR7405098.htseq SRR7405098 200 mM NaCl for 16 hrs Col_0_NaCl1 GSM3208265 Seedling Salinity stress 0.33
SRR7160929.htseq SRR7160929 osmotic stress r2 GSM3140729 Seedling Osmotic stress 0.18
SRR7405103.htseq SRR7405103 200 mM NaCl for 16 hrs Col_0_NaCl2 GSM3208266 Seedling Salinity stress 1.56
SRR7405106.htseq SRR7405106 200 mM NaCl for 16 hrs Col_0_NaCl3 GSM3208267 Seedling Salinity stress 0.88
SRR7774145.htseq SRR7774145 heat stress 30oC 1h AM ZT 0.5 rep2 GSM3370070 Seedling Heat stress 0.03
SRR7405107.htseq SRR7405107 200 mM NaCl for 16 hrs Col_0_NaCl3 GSM3208267 Seedling Salinity stress 0.25
SRR7774148.htseq SRR7774148 heat stress 30oC 1h PM ZT 12.5 rep1 GSM3370073 Seedling Heat stress 0.08
SRR7405096.htseq SRR7405096 200 mM NaCl for 16 hrs Col_0_NaCl1 GSM3208265 Seedling Salinity stress 0.33
SRR9016750.htseq SRR9016750 cold stress 4oC 24h rep 1 GSM3752566 Seedling Cold stress 1.00
SRR9016746.htseq SRR9016746 cold stress 4oC 0h rep 1 GSM3752562 Seedling Cold stress 0.08
SRR5167849.htseq SRR5167849 WT dehydration3 GSM2453040 Leaf Dehydration 0.03
SRR5968352.htseq SRR5968352 WT heat stress 44oC GSM2752982 Seedling Heat stress 0.12
SRR9016751.htseq SRR9016751 cold stress 4oC 24h rep 2 GSM3752567 Seedling Cold stress 1.48
SRR5197909.htseq SRR5197909 WT RL3h rep3 heat stress 37C 3h GSM2467115 Leaf Heat stress 0.12
SRR8667487.htseq SRR8667487 cold stress 4oC 3h rep1 GSM3639339 Seedling Cold stress 1.44
SRR2302911.htseq SRR2302911 Col s1R salinity stress GSM1872389 Leaf Salinity stress 0.25
SRR2302916.htseq SRR2302916 Col h3R heat stress 44oC 1h GSM1872394 Leaf Heat stress 0.08
SRR8667489.htseq SRR8667489 cold stress 4oC 3h rep3 GSM3639341 Seedling Cold stress 0.18
SRR2932377.htseq SRR2932377 dehydration 3h rep1 GSM1936771 Seedling Dehydration 3.93
SRR5197907.htseq SRR5197907 WT RL3h rep1 heat stress 37C 3h GSM2467113 Leaf Heat stress 0.31
SRR5167847.htseq SRR5167847 WT dehydration1 GSM2453038 Leaf Dehydration 0.17
SRR2302914.htseq SRR2302914 Col h1R heat stress 44oC 1h GSM1872392 Leaf Heat stress 0.07
SRR2932378.htseq SRR2932378 dehydration 3h rep1 GSM1936772 Seedling Dehydration 3.89
SRR8667484.htseq SRR8667484 cold stress 4oC 0h rep1 GSM3639336 Seedling Cold stress 0.09
SRR2932379.htseq SRR2932379 dehydration 3h rep3 GSM1936773 Seedling Dehydration 6.13
SRR2302912.htseq SRR2302912 Col s2R salinity stress GSM1872390 Leaf Salinity stress 0.09
SRR4011032.htseq SRR4011032 Aluminium stress Col_4h GSM2264185 Root Aluminium stress 0.09
SRR5167848.htseq SRR5167848 WT dehydration2 GSM2453039 Leaf Dehydration 0.08
SRR9016748.htseq SRR9016748 cold stress 4oC 3h rep 1 GSM3752564 Seedling Cold stress 0.07
SRR7774150.htseq SRR7774150 heat stress 30oC 1h PM ZT 12.5 rep3 GSM3370075 Seedling Heat stress 0.05
SRR7774151.htseq SRR7774151 heat stress 30oC 1h PM ZT 12.5 rep4 GSM3370076 Seedling Heat stress 0.04
SRR7774154.htseq SRR7774154 heat stress 30oC 1h AM ZT 0.5 and constant light GSM3370079 Seedling Heat stress 0.07
SRR7779219.htseq SRR7779219 drought stress without water for 5 days rep1 GSM3373992 Root Drought stress 452.27
SRR7779220.htseq SRR7779220 drought stress without water for 5 days rep2 GSM3373993 Root Drought stress 689.83
SRR7779221.htseq SRR7779221 drought stress without water for 5 days rep3 GSM3373994 Root Drought stress 658.49
SRR9696660.htseq SRR9696660 Heat stress rep1 GSM3945669 Leaf Heat stress 0.03
SRR9696663.htseq SRR9696663 Highlight stress rep2 GSM3945672 Leaf High light stress 0.03
SRR9696664.htseq SRR9696664 Heat stress rep2 GSM3945673 Leaf Heat stress 0.03
SRR7774155.htseq SRR7774155 heat stress 30oC 1h PM ZT 12.5 and constant light GSM3370080 Seedling Heat stress 0.67
SRR7774149.htseq SRR7774149 heat stress 30oC 1h PM ZT 12.5 rep2 GSM3370074 Seedling Heat stress 0.16
SRR9696668.htseq SRR9696668 Heat stress rep3 GSM3945677 Leaf Heat stress 0.11
SRR7160930.htseq SRR7160930 osmotic stress r3 GSM3140730 Seedling Osmotic stress 0.18
SRR7659150.htseq SRR7659150 heat stress GSM3324329 Leaf Heat stress 0.04