Oryza sativa

mRNA: LOC_Os04g07590.1

ID: LOC_Os04g07590.1.MSUv7.0
Display: retrotransposon protein, putative, LINE subclass, expressed

DBxRefs: PACID:33113334

Gene: LOC_Os04g07590.MSUv7.0
Polypeptide: LOC_Os04g07590.1.MSUv7.0 retrotransposon protein, putative, LINE subclass, expressed

Location

Osativa_Chr4:4037450..4038926 -1

Assay source Assay name Assay description Biomaterial name Biomaterial description Treatment Score normalized (TPM)
SRR3466963.htseq SRR3466963 drought stress 2d GSM2137965 Leaf Drought stress 0.06
SRR5134066.htseq SRR5134066 Drougth stress 2 days GSM2441713 Root Drought stress 0.12
SRR4098183.htseq SRR4098183 Drought stress air dried GSM2298194 Seedling Drought stress 0.12
SRR4098186.htseq SRR4098186 Heat stress 50oC GSM2298197 Seedling Heat stress 0.40
SRR6326703.htseq SRR6326703 Drought stress GSM2866849 Shoot Drought stress 0.27
SRR6326702.htseq SRR6326702 Drought stress GSM2866848 Shoot Drought stress 0.06
SRR9201531.htseq SRR9201531 Salt stress 100 mN NaCl rep1 GSM3852644 Root Salinity stress 0.18
SRR9201532.htseq SRR9201532 Salt stress 100 mN NaCl rep2 GSM3852645 Root Salinity stress 0.11
SRR5796952.htseq SRR5796952 Heat stress 42oC 10min then 30oC 10min rep1 GSM2691964 Shoot Heat stress 0.26
SRR5796954.htseq SRR5796954 Heat stress 42oC 10min then 30oC 50min rep1 GSM2691966 Shoot Heat stress 0.27
SRR3209780.htseq SRR3209780 Short Day Drought stress S12 GSM2082868 Leaf Drought stress 0.13
SRR5796955.htseq SRR5796955 Heat stress 42oC 10min then 30oC 50min rep2 GSM2691967 Shoot Heat stress 0.35
SRR5796957.htseq SRR5796957 Heat stress 42oC 10min then 30oC 1h50min rep2 GSM2691969 Shoot Heat stress 0.11
SRR5796956.htseq SRR5796956 Heat stress 42oC 10min then 30oC 1h50min rep1 GSM2691968 Shoot Heat stress 0.31
SRR9201533.htseq SRR9201533 Salt stress 100 mN NaCl rep3 GSM3852646 Root Salinity stress 0.22
SRR5796959.htseq SRR5796959 Heat stress 42oC 10min then 30oC 9h50min rep2 GSM2691971 Shoot Heat stress 0.60
SRR5796958.htseq SRR5796958 Heat stress 42oC 10min then 30oC 9h50min rep1 GSM2691970 Shoot Heat stress 0.34