Oryza sativa

mRNA: LOC_Os03g03000.1

ID: LOC_Os03g03000.1.MSUv7.0
Display: helix-loop-helix DNA-binding domain containing protein, expressed

DBxRefs: PACID:33133387

Gene: LOC_Os03g03000.MSUv7.0
Polypeptide: LOC_Os03g03000.1.MSUv7.0 helix-loop-helix DNA-binding domain containing protein, expressed

Location

Osativa_Chr3:1226697..1227860 1

Assay source Assay name Assay description Biomaterial name Biomaterial description Treatment Score normalized (TPM)
SRR4098183.htseq SRR4098183 Drought stress air dried GSM2298194 Seedling Drought stress 0.32
SRR4098186.htseq SRR4098186 Heat stress 50oC GSM2298197 Seedling Heat stress 1.12
SRR6326703.htseq SRR6326703 Drought stress GSM2866849 Shoot Drought stress 1.37
SRR6326702.htseq SRR6326702 Drought stress GSM2866848 Shoot Drought stress 1.18
SRR5856931.htseq SRR5856931 Salt stress GSM2714236 Leaf Salinity stress 0.03
SRR5856930.htseq SRR5856930 Salt stress GSM2714235 Leaf Salinity stress 0.03
SRR3140959.htseq SRR3140959 Heat stress 45oC 12h GSM2053502 Leaf Heat stress 3.28
SRR3140960.htseq SRR3140960 Heat stress 45oC 24h GSM2053503 Leaf Heat stress 0.48
SRR3209771.htseq SRR3209771 Long Day Drought stress S3 GSM2082859 Leaf Drought stress 0.05
SRR3209775.htseq SRR3209775 Short Day Drought stress S7 GSM2082863 Leaf Drought stress 0.05
SRR5796952.htseq SRR5796952 Heat stress 42oC 10min then 30oC 10min rep1 GSM2691964 Shoot Heat stress 1.13
SRR5796954.htseq SRR5796954 Heat stress 42oC 10min then 30oC 50min rep1 GSM2691966 Shoot Heat stress 0.34
SRR3209776.htseq SRR3209776 Short Day Drought stress S8 GSM2082864 Leaf Drought stress 0.05
SRR5796955.htseq SRR5796955 Heat stress 42oC 10min then 30oC 50min rep2 GSM2691967 Shoot Heat stress 0.30
SRR5796957.htseq SRR5796957 Heat stress 42oC 10min then 30oC 1h50min rep2 GSM2691969 Shoot Heat stress 1.34
SRR5796956.htseq SRR5796956 Heat stress 42oC 10min then 30oC 1h50min rep1 GSM2691968 Shoot Heat stress 0.31
SRR5796959.htseq SRR5796959 Heat stress 42oC 10min then 30oC 9h50min rep2 GSM2691971 Shoot Heat stress 0.84
SRR5796958.htseq SRR5796958 Heat stress 42oC 10min then 30oC 9h50min rep1 GSM2691970 Shoot Heat stress 0.89