Oryza sativa

mRNA: LOC_Os12g03790.1

ID: LOC_Os12g03790.1.MSUv7.0
Display: rhamnogalacturonate lyase, putative, expressed

DBxRefs: PACID:33150024

Gene: LOC_Os12g03790.MSUv7.0
Polypeptide: LOC_Os12g03790.1.MSUv7.0 rhamnogalacturonate lyase, putative, expressed

Location

Osativa_Chr12:1541849..1546542 -1

Assay source Assay name Assay description Biomaterial name Biomaterial description Treatment Score normalized (TPM)
SRR4098186.htseq SRR4098186 Heat stress 50oC GSM2298197 Seedling Heat stress 0.26
SRR5134065.htseq SRR5134065 Drougth stress 2 days GSM2441712 Root Drought stress 0.16
SRR5134068.htseq SRR5134068 Drougth stress 3 days GSM2441715 Root Drought stress 0.16
SRR6326703.htseq SRR6326703 Drought stress GSM2866849 Shoot Drought stress 0.06
SRR6326702.htseq SRR6326702 Drought stress GSM2866848 Shoot Drought stress 0.03
SRR9201532.htseq SRR9201532 Salt stress 100 mN NaCl rep2 GSM3852645 Root Salinity stress 0.02
SRR5856931.htseq SRR5856931 Salt stress GSM2714236 Leaf Salinity stress 0.23
SRR5856930.htseq SRR5856930 Salt stress GSM2714235 Leaf Salinity stress 0.27
SRR3209778.htseq SRR3209778 Long Day Drought stress S10 GSM2082866 Leaf Drought stress 0.05
SRR5856932.htseq SRR5856932 Salt stress GSM2714237 Leaf Salinity stress 0.19
SRR5796952.htseq SRR5796952 Heat stress 42oC 10min then 30oC 10min rep1 GSM2691964 Shoot Heat stress 0.17
SRR5796954.htseq SRR5796954 Heat stress 42oC 10min then 30oC 50min rep1 GSM2691966 Shoot Heat stress 0.19
SRR5796955.htseq SRR5796955 Heat stress 42oC 10min then 30oC 50min rep2 GSM2691967 Shoot Heat stress 0.15
SRR5796957.htseq SRR5796957 Heat stress 42oC 10min then 30oC 1h50min rep2 GSM2691969 Shoot Heat stress 0.15
SRR5796956.htseq SRR5796956 Heat stress 42oC 10min then 30oC 1h50min rep1 GSM2691968 Shoot Heat stress 0.22
SRR5796958.htseq SRR5796958 Heat stress 42oC 10min then 30oC 9h50min rep1 GSM2691970 Shoot Heat stress 0.04