Oryza sativa

mRNA: LOC_Os01g65220.1

ID: LOC_Os01g65220.1.MSUv7.0
Display: XRN 5'-3' exonuclease N-terminus domain containing protein, expressed

DBxRefs: PACID:33120254

Gene: LOC_Os01g65220.MSUv7.0
Polypeptide: LOC_Os01g65220.1.MSUv7.0 XRN 5'-3' exonuclease N-terminus domain containing protein, expressed

Location

Osativa_Chr1:37844922..37852799 -1

Assay source Assay name Assay description Biomaterial name Biomaterial description Treatment Score normalized (TPM)
SRR3466963.htseq SRR3466963 drought stress 2d GSM2137965 Leaf Drought stress 80.00
SRR3466962.htseq SRR3466962 drought stress 2d GSM2137965 Leaf Drought stress 82.96
SRR5134066.htseq SRR5134066 Drougth stress 2 days GSM2441713 Root Drought stress 130.39
SRR4098183.htseq SRR4098183 Drought stress air dried GSM2298194 Seedling Drought stress 6.78
SRR3466965.htseq SRR3466965 drought stress 3d GSM2137966 Leaf Drought stress 115.71
SRR3466964.htseq SRR3466964 drought stress 3d GSM2137966 Leaf Drought stress 116.53
SRR4098186.htseq SRR4098186 Heat stress 50oC GSM2298197 Seedling Heat stress 106.11
SRR5134065.htseq SRR5134065 Drougth stress 2 days GSM2441712 Root Drought stress 127.84
SRR3466960.htseq SRR3466960 drought stress 1d GSM2137964 Leaf Drought stress 106.88
SRR3466961.htseq SRR3466961 drought stress 1d GSM2137964 Leaf Drought stress 106.04
SRR5134067.htseq SRR5134067 Drougth stress 3 days GSM2441714 Root Drought stress 162.10
SRR5134068.htseq SRR5134068 Drougth stress 3 days GSM2441715 Root Drought stress 151.58
SRR6326703.htseq SRR6326703 Drought stress GSM2866849 Shoot Drought stress 74.42
SRR6326702.htseq SRR6326702 Drought stress GSM2866848 Shoot Drought stress 80.61
SRR9201545.htseq SRR9201545 Salt stress 100 mN NaCl rep3 GSM3852658 Shoot Salinity stress 20.10
SRR9201531.htseq SRR9201531 Salt stress 100 mN NaCl rep1 GSM3852644 Root Salinity stress 16.15
SRR9201532.htseq SRR9201532 Salt stress 100 mN NaCl rep2 GSM3852645 Root Salinity stress 14.31
SRR5856931.htseq SRR5856931 Salt stress GSM2714236 Leaf Salinity stress 16.69
SRR5856930.htseq SRR5856930 Salt stress GSM2714235 Leaf Salinity stress 14.42
SRR9201544.htseq SRR9201544 Salt stress 100 mN NaCl rep2 GSM3852657 Shoot Salinity stress 15.26
SRR9201543.htseq SRR9201543 Salt stress 100 mN NaCl rep1 GSM3852656 Shoot Salinity stress 7.89
SRR3140959.htseq SRR3140959 Heat stress 45oC 12h GSM2053502 Leaf Heat stress 25.76
SRR3140960.htseq SRR3140960 Heat stress 45oC 24h GSM2053503 Leaf Heat stress 12.61
SRR3209771.htseq SRR3209771 Long Day Drought stress S3 GSM2082859 Leaf Drought stress 44.68
SRR3209772.htseq SRR3209772 Long Day Drought stress S4 GSM2082860 Leaf Drought stress 41.00
SRR3209775.htseq SRR3209775 Short Day Drought stress S7 GSM2082863 Leaf Drought stress 48.97
SRR3209778.htseq SRR3209778 Long Day Drought stress S10 GSM2082866 Leaf Drought stress 50.68
SRR5856932.htseq SRR5856932 Salt stress GSM2714237 Leaf Salinity stress 14.74
SRR5311340.htseq SRR5311340 heat stress 35oC 6h GSM2520922 Leaf Heat stress 79.67
SRR5311341.htseq SRR5311341 heat stress 35oC 6h GSM2520923 Leaf Heat stress 76.20
SRR5796952.htseq SRR5796952 Heat stress 42oC 10min then 30oC 10min rep1 GSM2691964 Shoot Heat stress 60.94
SRR5796954.htseq SRR5796954 Heat stress 42oC 10min then 30oC 50min rep1 GSM2691966 Shoot Heat stress 77.58
SRR3209780.htseq SRR3209780 Short Day Drought stress S12 GSM2082868 Leaf Drought stress 43.40
SRR3209776.htseq SRR3209776 Short Day Drought stress S8 GSM2082864 Leaf Drought stress 55.66
SRR5796955.htseq SRR5796955 Heat stress 42oC 10min then 30oC 50min rep2 GSM2691967 Shoot Heat stress 80.01
SRR5796957.htseq SRR5796957 Heat stress 42oC 10min then 30oC 1h50min rep2 GSM2691969 Shoot Heat stress 115.80
SRR5796956.htseq SRR5796956 Heat stress 42oC 10min then 30oC 1h50min rep1 GSM2691968 Shoot Heat stress 112.28
SRR9201533.htseq SRR9201533 Salt stress 100 mN NaCl rep3 GSM3852646 Root Salinity stress 15.66
SRR5796959.htseq SRR5796959 Heat stress 42oC 10min then 30oC 9h50min rep2 GSM2691971 Shoot Heat stress 22.11
SRR5796958.htseq SRR5796958 Heat stress 42oC 10min then 30oC 9h50min rep1 GSM2691970 Shoot Heat stress 31.23