Oryza sativa

mRNA: LOC_Os01g02110.1

ID: LOC_Os01g02110.1.MSUv7.0
Display: helix-loop-helix DNA-binding domain containing protein, expressed

DBxRefs: PACID:33121511

Gene: LOC_Os01g02110.MSUv7.0
Polypeptide: LOC_Os01g02110.1.MSUv7.0 helix-loop-helix DNA-binding domain containing protein, expressed

Location

Osativa_Chr1:603642..605643 -1

Assay source Assay name Assay description Biomaterial name Biomaterial description Treatment Score normalized (TPM)
SRR3466962.htseq SRR3466962 drought stress 2d GSM2137965 Leaf Drought stress 0.07
SRR5134066.htseq SRR5134066 Drougth stress 2 days GSM2441713 Root Drought stress 1.61
SRR4098183.htseq SRR4098183 Drought stress air dried GSM2298194 Seedling Drought stress 0.86
SRR3466964.htseq SRR3466964 drought stress 3d GSM2137966 Leaf Drought stress 0.13
SRR4098186.htseq SRR4098186 Heat stress 50oC GSM2298197 Seedling Heat stress 0.60
SRR5134065.htseq SRR5134065 Drougth stress 2 days GSM2441712 Root Drought stress 0.35
SRR5134067.htseq SRR5134067 Drougth stress 3 days GSM2441714 Root Drought stress 0.57
SRR5134068.htseq SRR5134068 Drougth stress 3 days GSM2441715 Root Drought stress 0.57
SRR6326702.htseq SRR6326702 Drought stress GSM2866848 Shoot Drought stress 0.02
SRR9201545.htseq SRR9201545 Salt stress 100 mN NaCl rep3 GSM3852658 Shoot Salinity stress 0.05
SRR9201531.htseq SRR9201531 Salt stress 100 mN NaCl rep1 GSM3852644 Root Salinity stress 0.49
SRR9201532.htseq SRR9201532 Salt stress 100 mN NaCl rep2 GSM3852645 Root Salinity stress 0.45
SRR5856931.htseq SRR5856931 Salt stress GSM2714236 Leaf Salinity stress 1.05
SRR5856930.htseq SRR5856930 Salt stress GSM2714235 Leaf Salinity stress 0.87
SRR9201543.htseq SRR9201543 Salt stress 100 mN NaCl rep1 GSM3852656 Shoot Salinity stress 0.44
SRR3140959.htseq SRR3140959 Heat stress 45oC 12h GSM2053502 Leaf Heat stress 0.47
SRR5856932.htseq SRR5856932 Salt stress GSM2714237 Leaf Salinity stress 1.07
SRR5796952.htseq SRR5796952 Heat stress 42oC 10min then 30oC 10min rep1 GSM2691964 Shoot Heat stress 0.04
SRR3209780.htseq SRR3209780 Short Day Drought stress S12 GSM2082868 Leaf Drought stress 0.06
SRR5796955.htseq SRR5796955 Heat stress 42oC 10min then 30oC 50min rep2 GSM2691967 Shoot Heat stress 0.35
SRR5796957.htseq SRR5796957 Heat stress 42oC 10min then 30oC 1h50min rep2 GSM2691969 Shoot Heat stress 0.11
SRR9201533.htseq SRR9201533 Salt stress 100 mN NaCl rep3 GSM3852646 Root Salinity stress 0.40